RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
SCAP-208ENST00000448217 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
SCAP-208ENST00000448217 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCAP-208ENST00000448217 NOSTRINQ8IVI9 506 aa13.68□□□□□ -0.22
SCAP-208ENST00000448217 TNPO1Q92973 898 aaKnown RBP13.68□□□□□ -0.22
SCAP-208ENST00000448217 PTPN18Q99952 460 aa13.68□□□□□ -0.22
SCAP-208ENST00000448217 TEX13BQ9BXU2 312 aa13.68□□□□□ -0.22
SCAP-208ENST00000448217 MAP3K20Q9NYL2 800 aaKnown RBP13.68□□□□□ -0.22
SCAP-208ENST00000448217 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
SCAP-208ENST00000448217 ABT1Q9ULW3 272 aaKnown RBP13.68□□□□□ -0.22
SCAP-208ENST00000448217 RABGAP1Q9Y3P9 1069 aa13.68□□□□□ -0.22
SCAP-208ENST00000448217 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
SCAP-208ENST00000448217 TCHHQ07283 1943 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 PDHXO00330 501 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 OPLAHO14841 1288 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 TM4SF4P48230 202 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 GCLCP48506 637 aaPredicted RBP13.67□□□□□ -0.22
SCAP-208ENST00000448217 ADCY7P51828 1080 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 FOSBP53539 338 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 SNAP25P60880 206 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 TMEM132BQ14DG7 1078 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 CCDC174Q6PII3 467 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
SCAP-208ENST00000448217 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 CUL5Q93034 780 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 AGBL1Q96MI9 1066 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 PSTPIP2Q9H939 334 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
SCAP-208ENST00000448217 MEIS2O14770 477 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 CNMDO75829 334 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 COPB2P35606 906 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 STAT3P40763 770 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 TRAPPC10P48553 1259 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 SREBF2Q12772 1141 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 NOGQ13253 232 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 NR5A1Q13285 461 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 KRT25Q7Z3Z0 450 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
SCAP-208ENST00000448217 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 CLEC4DQ8WXI8 215 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 PARK7Q99497 189 aaKnown RBP13.66□□□□□ -0.22
SCAP-208ENST00000448217 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
SCAP-208ENST00000448217 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 PCDHA6Q9UN73 950 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 CTDP1Q9Y5B0 961 aaPredicted RBP13.66□□□□□ -0.22
SCAP-208ENST00000448217 PCDHA8Q9Y5H6 950 aa13.66□□□□□ -0.22
SCAP-208ENST00000448217 ADGRA2Q96PE1 1338 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
SCAP-208ENST00000448217 HSD17B4P51659 736 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
SCAP-208ENST00000448217 AP3B2Q13367 1082 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 USH1GQ495M9 461 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 CHST13Q8NET6 341 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 BTBD7Q9P203 1132 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
SCAP-208ENST00000448217 IGF2BP3O00425 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCAP-208ENST00000448217 ADAMTS3O15072 1205 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 SLC25A27O95847 323 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 GNL2Q13823 731 aaKnown RBP13.64□□□□□ -0.23
SCAP-208ENST00000448217 RILPL1Q5EBL4 403 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 SNRNP48Q6IEG0 339 aaKnown RBP13.64□□□□□ -0.23
SCAP-208ENST00000448217 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 SHCBP1Q8NEM2 672 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 TRERF1Q96PN7 1200 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 FBXO40Q9UH90 709 aa13.64□□□□□ -0.23
SCAP-208ENST00000448217 MORC2Q9Y6X9 1032 aaPredicted RBP13.64□□□□□ -0.23
SCAP-208ENST00000448217 GCOM1H8Y6P7 765 aaPredicted RBP13.63□□□□□ -0.23
SCAP-208ENST00000448217 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
SCAP-208ENST00000448217 POLR2MP0CAP2 368 aa13.63□□□□□ -0.23
SCAP-208ENST00000448217 ALAS1P13196 640 aa13.63□□□□□ -0.23
SCAP-208ENST00000448217 FOXD4L5Q5VV16 416 aaPredicted RBP13.63□□□□□ -0.23
SCAP-208ENST00000448217 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
SCAP-208ENST00000448217 FOXD4L4Q8WXT5 416 aaPredicted RBP13.63□□□□□ -0.23
SCAP-208ENST00000448217 CAPNS2Q96L46 248 aa13.63□□□□□ -0.23
SCAP-208ENST00000448217 ZNF396Q96N95 335 aaPredicted RBP13.63□□□□□ -0.23
SCAP-208ENST00000448217 ACAD9Q9H845 621 aa13.63□□□□□ -0.23
SCAP-208ENST00000448217 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
SCAP-208ENST00000448217 RIPK3Q9Y572 518 aa13.63□□□□□ -0.23
SCAP-208ENST00000448217 THSD7BQ9C0I4 1608 aa13.63□□□□□ -0.23
SCAP-208ENST00000448217 MYH7BA7E2Y1 1941 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 CCDC194A0A1B0GVG4 234 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 NFIBO00712 420 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 ALDH1A1P00352 501 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 CYP2C8P10632 490 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 NASPP49321 788 aaPredicted RBP13.62□□□□□ -0.23
SCAP-208ENST00000448217 TOB1P50616 345 aaPredicted RBP13.62□□□□□ -0.23
SCAP-208ENST00000448217 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 ERVK-24P63145 666 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 KRT85P78386 507 aa13.62□□□□□ -0.23
SCAP-208ENST00000448217 ORC2Q13416 577 aaPredicted RBP13.62□□□□□ -0.23
SCAP-208ENST00000448217 NONOQ15233 471 aaKnown RBP eCLIP13.62□□□□□ -0.233e-6■■■■□ 21.9
SCAP-208ENST00000448217 FAM110CQ1W6H9 321 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms