RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 CCDC93Q567U6 631 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 OTUD6AQ7L8S5 288 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ANTXR1Q9H6X2 564 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 RNF14Q9UBS8 474 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ZNF148Q9UQR1 794 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 TTLL3Q9Y4R7 772 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 GCC2Q8IWJ2 1684 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ZBED4O75132 1171 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 DDAH1O94760 285 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 HSP90AA5PQ58FG0 334 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 MIER3Q7Z3K6 550 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 RPAINQ86UA6 219 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 SLFN12Q8IYM2 578 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 MAGOHBQ96A72 148 aaKnown RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 FOXP1Q9H334 677 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 PSTPIP2Q9H939 334 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 EPB41L5Q9HCM4 733 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 MED23Q9ULK4 1368 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 FAM170AA1A519 330 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 KLRF2D3W0D1 207 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 MGEA5O60502 916 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 TRAPPC10P48553 1259 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CLCN6P51797 869 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 BFSP1Q12934 665 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 NLRX1Q86UT6 975 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 PPM1KQ8N3J5 372 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 TCP11Q8WWU5 503 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 DHTKD1Q96HY7 919 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 PARD6BQ9BYG5 372 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 HAUS2Q9NVX0 235 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 PPP1R9AQ9ULJ8 1098 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 DAAM1Q9Y4D1 1078 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CD2BP2O95400 341 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 RBL2Q08999 1139 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 AOC3Q16853 763 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 BRDTQ58F21 947 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 NSUN7Q8NE18 718 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 DEPTORQ8TB45 409 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CDCA7Q9BWT1 371 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CARD10Q9BWT7 1032 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 TRIM4Q9C037 500 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 SPATS2LQ9NUQ6 558 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 SPTLC3Q9NUV7 552 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 TPX2Q9ULW0 747 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 SART1O43290 800 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 LMNB2Q03252 620 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 KRT81Q14533 505 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 RBBP5Q15291 538 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 PRR16Q569H4 304 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 LRCH2Q5VUJ6 765 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 FNBP4Q8N3X1 1017 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 KLHL29Q96CT2 875 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 HVCN1Q96D96 273 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 FAF1Q9UNN5 650 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 ZMYND10O75800 440 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 PCP11498 1178 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 STMN1P16949 149 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 LMNB1P20700 586 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CNGA1P29973 690 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 POLR2BP30876 1174 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 UBE3CQ15386 1083 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 NXNQ6DKJ4 435 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 ENOX1Q8TC92 643 aaKnown RBP8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CHURC1Q8WUH1 139 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 EEF2KMTQ96G04 330 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 SPZ1Q9BXG8 430 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 CARMIL3Q8ND23 1372 aa8.5□□□□□ -1.05
NEDD9-204ENST00000448183 PGRMC1O00264 195 aaKnown RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 CTNND1O60716 968 aaKnown RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 CTSWP56202 376 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 GABPAQ06546 454 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 E2F5Q15329 346 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 LINC00301Q8NCQ3 95 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 MIS12Q9H081 205 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 K7ENM7 598 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 LAD1O00515 517 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 STAM2O75886 525 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 CYP21A2P08686 494 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 RPSAP08865 295 aaKnown RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 SERPINB6P35237 376 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 NSFP46459 744 aaKnown RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 GOLGA8FQ08AF8 430 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 GOLGA8DPQ0D2H9 430 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 APOA5Q6Q788 366 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 GPKOWQ92917 476 aaPredicted RBP eCLIP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 RNF26Q9BY78 433 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 H0YCG3 227 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 MYO1FO00160 1098 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 SMIM24O75264 130 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 SLFN14P0C7P3 912 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 RPS8P62241 208 aaKnown RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 DIXDC1Q155Q3 683 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 TRMT2AQ8IZ69 625 aaKnown RBP8.49□□□□□ -1.05
NEDD9-204ENST00000448183 SCYL3Q8IZE3 742 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 ANKRD35Q8N283 1001 aa8.49□□□□□ -1.05
NEDD9-204ENST00000448183 SDR42E1Q8WUS8 393 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms