RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 GBP2P32456 591 aaPredicted RBP7.9□□□□□ -1.14
USP49-205ENST00000448078 CRKLP46109 303 aaKnown RBP7.9□□□□□ -1.14
USP49-205ENST00000448078 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.14
USP49-205ENST00000448078 RPS26P62854 115 aaKnown RBP7.9□□□□□ -1.14
USP49-205ENST00000448078 LRP8Q14114 963 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 WIPI1Q5MNZ9 446 aaPredicted RBP7.9□□□□□ -1.14
USP49-205ENST00000448078 RASIP1Q5U651 963 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 ZDHHC13Q8IUH4 622 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 ABT1Q9ULW3 272 aaKnown RBP7.9□□□□□ -1.14
USP49-205ENST00000448078 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 PCDHB5Q9Y5E4 795 aa7.9□□□□□ -1.14
USP49-205ENST00000448078 USP42Q9H9J4 1324 aaKnown RBP7.89□□□□□ -1.15
USP49-205ENST00000448078 A0A087WZG4 1122 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 MINDY4BA8MYZ0 360 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 POLRMTO00411 1230 aaKnown RBP7.89□□□□□ -1.15
USP49-205ENST00000448078 DYNC1LI2O43237 492 aaPredicted RBP7.89□□□□□ -1.15
USP49-205ENST00000448078 CA12O43570 354 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 SERPINB2P05120 415 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 FAM87AP0C7U9 286 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 CYP27C1Q4G0S4 372 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 SCARA3Q6AZY7 606 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 INTS5Q6P9B9 1019 aaKnown RBP7.89□□□□□ -1.15
USP49-205ENST00000448078 Q8N3U1 123 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 ISL2Q96A47 359 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 PLPPR2Q96GM1 343 aa7.89□□□□□ -1.15
USP49-205ENST00000448078 NOC4LQ9BVI4 516 aaKnown RBP7.89□□□□□ -1.15
USP49-205ENST00000448078 SRP68Q9UHB9 627 aaKnown RBP7.89□□□□□ -1.15
USP49-205ENST00000448078 CTSHP09668 335 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 ADMP35318 185 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 DDR1Q08345 913 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 PWP1Q13610 501 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 SNAP47Q5SQN1 464 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 LRFN4Q6PJG9 635 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.88□□□□□ -1.15
USP49-205ENST00000448078 ZNF765Q7L2R6 523 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 TMEM87AQ8NBN3 555 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 KCT2Q8NC54 265 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 SIN3AQ96ST3 1273 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 TAOK3Q9H2K8 898 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 GSX1Q9H4S2 264 aaPredicted RBP7.88□□□□□ -1.15
USP49-205ENST00000448078 NARFQ9UHQ1 456 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 ANGEL1Q9UNK9 670 aaKnown RBP7.88□□□□□ -1.15
USP49-205ENST00000448078 PCDHGC5Q9Y5F6 944 aa7.88□□□□□ -1.15
USP49-205ENST00000448078 TONSLQ96HA7 1378 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 WDR33Q9C0J8 1336 aaKnown RBP7.87□□□□□ -1.15
USP49-205ENST00000448078 FANCGO15287 622 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 DDNO94850 711 aaPredicted RBP7.87□□□□□ -1.15
USP49-205ENST00000448078 NEFMP07197 916 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 HSPA8P11142 646 aaKnown RBP7.87□□□□□ -1.15
USP49-205ENST00000448078 INPP5AQ14642 412 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 ARTNQ5T4W7 220 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 ZNF530Q6P9A1 599 aaPredicted RBP7.87□□□□□ -1.15
USP49-205ENST00000448078 AGMOQ6ZNB7 445 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 CNTROBQ8N137 903 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 ZNF507Q8TCN5 953 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 BRIP1Q9BX63 1249 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 HACL1Q9UJ83 578 aa7.87□□□□□ -1.15
USP49-205ENST00000448078 USP54Q70EL1 1684 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 TNRC6CQ9HCJ0 1690 aaKnown RBP7.86□□□□□ -1.15
USP49-205ENST00000448078 RASSF10A6NK89 507 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 STARD3NLO95772 234 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
USP49-205ENST00000448078 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 PTPN11Q06124 597 aaPredicted RBP7.86□□□□□ -1.15
USP49-205ENST00000448078 NFIXQ14938 502 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 CPSF6Q16630 551 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP49-205ENST00000448078 TOP6BLQ8N6T0 577 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 GPR101Q96P66 508 aaPredicted RBP7.86□□□□□ -1.15
USP49-205ENST00000448078 TAF1DQ9H5J8 278 aaPredicted RBP7.86□□□□□ -1.15
USP49-205ENST00000448078 GGT7Q9UJ14 662 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 SNCAIPQ9Y6H5 919 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 MON2Q7Z3U7 1717 aa7.86□□□□□ -1.15
USP49-205ENST00000448078 UBR3Q6ZT12 1888 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 TAF1LQ8IZX4 1826 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 N4BP2Q86UW6 1770 aaPredicted RBP7.85□□□□□ -1.15
USP49-205ENST00000448078 HYAL3O43820 417 aaPredicted RBP7.85□□□□□ -1.15
USP49-205ENST00000448078 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
USP49-205ENST00000448078 MAP2K2P36507 400 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 TSNAXIP1Q2TAA8 658 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 ZBTB37Q5TC79 503 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 HS2ST1Q7LGA3 356 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 SHISA5Q8N114 240 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 C1GALT1Q9NS00 363 aa7.85□□□□□ -1.15
USP49-205ENST00000448078 PASKQ96RG2 1323 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 C4AP0C0L4 1744 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 PF4P02776 101 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 FOSL1P15407 271 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 GRK4P32298 578 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 EPHX2P34913 555 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 ST5P78524 1137 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 PDE4BQ07343 736 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 GRM1Q13255 1194 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 RTKN2Q8IZC4 609 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 JDP2Q8WYK2 163 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 GAL3ST3Q96A11 431 aa7.84□□□□□ -1.15
USP49-205ENST00000448078 TEX13AQ9BXU3 409 aaPredicted RBP7.84□□□□□ -1.15
USP49-205ENST00000448078 KDM6AO15550 1401 aaPredicted RBP7.84□□□□□ -1.15
USP49-205ENST00000448078 PRR19A6NJB7 356 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms