RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 RHOQP17081 205 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 OXLD1Q5BKU9 147 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 MFSD14CQ5VZR4 134 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 NAA16Q6N069 864 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 CYP2U1Q7Z449 544 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 ADGRA1Q86SQ6 560 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 PHTF2Q8N3S3 785 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 CRACR2BQ8N4Y2 399 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 CCDC155Q8N6L0 562 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 EDC3Q96F86 508 aaKnown RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 CDX2Q99626 313 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 API5Q9BZZ5 524 aaKnown RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 CWC22Q9HCG8 908 aaKnown RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 AATFQ9NY61 560 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 DDX20Q9UHI6 824 aaKnown RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 PALD1Q9ULE6 856 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 DOLKQ9UPQ8 538 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 MYO5AQ9Y4I1 1855 aaKnown RBP7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 PRUNE2Q8WUY3 3088 aa7.12□□□□□ -1.27
HMGN1P36-201ENST00000446623 SLC15A5A6NIM6 579 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 DNM1LO00429 736 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 WIPF1O43516 503 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 TRAK2O60296 914 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 STAU1O95793 577 aaKnown RBP7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 GH2P01242 217 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 GNAI3P08754 354 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 HOXC6P09630 235 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 UQCRFS1P1P0C7P4 283 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 CNGA1P29973 690 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 CYP2C19P33261 490 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 RTP1P59025 263 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 CCNA1P78396 465 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 ZYXQ15942 572 aaKnown RBP7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L2Q6R6M4 530 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 LYSMD3Q7Z3D4 306 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 TRPV1Q8NER1 839 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 LPAR1Q92633 364 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 PRKAG2Q9UGJ0 569 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 SAP30BPQ9UHR5 308 aaKnown RBP7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 ATP11BQ9Y2G3 1177 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 RABGAP1Q9Y3P9 1069 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 MYH1P12882 1939 aa7.11□□□□□ -1.27
HMGN1P36-201ENST00000446623 SLC35F4A4IF30 521 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L15C9J2P7 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L13C9JLJ4 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L11C9JVI0 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L18D6R9N7 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L22D6RA61 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L17D6RBQ6 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L19D6RCP7 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L20D6RJB6 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 PIK3CDO00329 1044 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 MSCO60682 206 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 IGHA2P01877 340 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 HLA-DOAP06340 250 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 RNF144AP50876 292 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 ATP2B2Q01814 1243 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP17L24Q0WX57 530 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 GRB14Q14449 540 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 SHHQ15465 462 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 C9orf50Q5SZB4 431 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 GJC2Q5T442 439 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 WDR78Q5VTH9 848 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 TATDN1Q6P1N9 297 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 CATSPERGQ6ZRH7 1159 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 TRMT2AQ8IZ69 625 aaKnown RBP7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 MAFAQ8NHW3 353 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 C12orf42Q96LP6 360 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 FEZ1Q99689 392 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 TTYH1Q9H313 450 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 SEMA6BQ9H3T3 888 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 BTBD7Q9P203 1132 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 ZNF236Q9UL36 1845 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 CHD9Q3L8U1 2897 aa7.1□□□□□ -1.27
HMGN1P36-201ENST00000446623 PNMA6EA0A0J9YXQ4 647 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 POM121CA8CG34 1229 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 CYP2E1P05181 493 aaPredicted RBP7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 CT47B1P0C2W7 299 aaPredicted RBP7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 CYBAP13498 195 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 VCAM1P19320 739 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 USP14P54578 494 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 DYNLL1P63167 89 aaKnown RBP7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 G3BP1Q13283 466 aaKnown RBP eCLIP7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 SNX17Q15036 470 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 TTC39AQ5SRH9 613 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 ATF7IPQ6VMQ6 1270 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 LBX2Q6XYB7 198 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 SLC39A5Q6ZMH5 540 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 ARRDC4Q8NCT1 418 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 NPLOC4Q8TAT6 608 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 ACER1Q8TDN7 264 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 MYLIPQ8WY64 445 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 CLUAP1Q96AJ1 413 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 KIAA1683Q9H0B3 1180 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 PRDM6Q9NQX0 595 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 IVNS1ABPQ9Y6Y0 642 aa7.09□□□□□ -1.27
HMGN1P36-201ENST00000446623 A0A0G2JMZ2 1700 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms