RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 ZBED6P86452 979 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 AMPD3Q01432 767 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 FIGNQ5HY92 759 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 NEK11Q8NG66 645 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 C7orf25Q9BPX7 421 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 SPZ1Q9BXG8 430 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 SAR1BQ9Y6B6 198 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 IRS2Q9Y4H2 1338 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 PPP4CP60510 307 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 HERVK_113P62684 666 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 CDK17Q00537 523 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 CKAP4Q07065 602 aaKnown RBP24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 CABP7Q86V35 215 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 NBPF5PQ86XG9 351 aaPredicted RBP24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 DUSP9Q99956 384 aaKnown RBP24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
SKIDA1-201ENST00000444772 CYTH3O43739 400 aa24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 TOM1O60784 492 aa24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 OR52Z1P0C646 297 aa24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 CASP8Q14790 479 aa24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 FLT1P17948 1338 aa24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 A0A1W2PQJ5 194 aa24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 EIF3CLB5ME19 914 aaKnown RBP24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 TRIM21P19474 475 aaKnown RBP24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 NOA1Q8NC60 698 aaKnown RBP24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 EIF3CQ99613 913 aaKnown RBP24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 TRIM9Q9C026 710 aa24.29■■□□□ 1.48
SKIDA1-201ENST00000444772 ANO9A1A5B4 782 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 MAP9Q49MG5 647 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 TPTE2Q6XPS3 522 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 KIAA1328Q86T90 577 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 VIPAS39Q9H9C1 493 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 MED4Q9NPJ6 270 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 COL24A1Q17RW2 1714 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 B4DLN1 442 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 PLCG1P19174 1290 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 GNA11P29992 359 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 TBC1D8BQ0IIM8 1120 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 SLC35G1Q2M3R5 365 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 HSP90B2PQ58FF3 399 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 NCAPH2Q6IBW4 605 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 DYNLL2Q96FJ2 89 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 TARSL2A2RTX5 802 aaKnown RBP24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 LDHCP07864 332 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 SMARCA1P28370 1054 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 USP14P54578 494 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 NONOQ15233 471 aaKnown RBP eCLIP24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 ZSCAN29Q8IWY8 852 aaPredicted RBP24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 FAM71BQ8TC56 605 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 JAKMIP2Q96AA8 810 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 TMEM47Q9BQJ4 181 aa24.28■■□□□ 1.48
SKIDA1-201ENST00000444772 USP17L3A6NCW0 530 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 USP17L4A6NCW7 530 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 KCNQ2O43526 872 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 RC3H1Q5TC82 1133 aaKnown RBP24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 USP17L1Q7RTZ2 530 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 GOLGA5Q8TBA6 731 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 ERGIC2Q96RQ1 377 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 C6orf50Q9HD87 102 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 CWC15Q9P013 229 aaKnown RBP24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 TRIM10Q9UDY6 481 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 HOXA7P31268 230 aaPredicted RBP24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 PDE4DQ08499 809 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 CNNM4Q6P4Q7 775 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 SH3RF3Q8TEJ3 882 aaPredicted RBP24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 TSGA10Q9BZW7 698 aa24.27■■□□□ 1.48
SKIDA1-201ENST00000444772 MYH1P12882 1939 aa24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 TFRCP02786 760 aaKnown RBP24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 CNOT6LQ96LI5 555 aaKnown RBP24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 KLRF2D3W0D1 207 aa24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 TXNRD1Q16881 649 aa24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 TXNRD3Q86VQ6 643 aa24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 NHEJ1Q9H9Q4 299 aaPredicted RBP24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 VPS18Q9P253 973 aa24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 LEMD3Q9Y2U8 911 aa24.26■■□□□ 1.47
SKIDA1-201ENST00000444772 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 TULP2O00295 520 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 NAPAP54920 295 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 ZSCAN26Q16670 478 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 FKBP15Q5T1M5 1219 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 PLIN2Q99541 437 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 STX8Q9UNK0 236 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 MTIF2P46199 727 aaKnown RBP24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 ASIC1P78348 528 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 ANKRD40Q6AI12 368 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 NEK8Q86SG6 692 aa24.25■■□□□ 1.47
SKIDA1-201ENST00000444772 ATP1A1P05023 1023 aaKnown RBP24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 RASA1P20936 1047 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 LMAN1P49257 510 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 IQCEQ6IPM2 695 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 PURBQ96QR8 312 aaKnown RBP24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 NOC4LQ9BVI4 516 aaKnown RBP24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 AGPAT5Q9NUQ2 364 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 CCNT1O60563 726 aaKnown RBP24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 RPS6KA4O75676 772 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 TM4SF1P30408 202 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 SLC4A8Q2Y0W8 1093 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 LRRC15Q8TF66 581 aa24.24■■□□□ 1.47
SKIDA1-201ENST00000444772 NUTM2BA6NNL0 878 aaPredicted RBP24.23■■□□□ 1.47
SKIDA1-201ENST00000444772 NUTM2EB1AL46 878 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms