RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 EMC9Q9Y3B6 208 aa6.93□□□□□ -1.3
AC003001.1-201ENST00000443247 NOP56O00567 594 aaKnown RBP6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 KLF4O43474 513 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 STK10O94804 968 aaKnown RBP6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 PDE6BP35913 854 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 SV2CQ496J9 727 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 ADGRF1Q5T601 910 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 HLA-DQA1Q5Y7H0 255 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 POMZP3Q6PJE2 187 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 JAMLQ86YT9 394 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 IRF2BP1Q8IU81 584 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 NUP43Q8NFH3 380 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 KCNK12Q9HB15 430 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 IMPACTQ9P2X3 320 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 BACE2Q9Y5Z0 518 aa6.92□□□□□ -1.3
AC003001.1-201ENST00000443247 C2orf71A6NGG8 1288 aa6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 PRKCAP17252 672 aa6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 SEPHS1P49903 392 aa6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 DDR2Q16832 855 aa6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 EEF1DP3Q658K8 133 aa6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 TRIM59Q8IWR1 403 aa6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 FBXO15Q8NCQ5 510 aaPredicted RBP6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 CRTAC1Q9NQ79 661 aa6.91□□□□□ -1.3
AC003001.1-201ENST00000443247 DBX1A6NMT0 343 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 TBC1D8O95759 1140 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 PNLIPP16233 465 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 ATP2B1P20020 1258 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 SDHBP21912 280 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 GTF2IRD2BQ6EKJ0 949 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 SYDE1Q6ZW31 735 aaPredicted RBP6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 ZNF605Q86T29 641 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 GTF2IRD2Q86UP8 949 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 ZNF227Q86WZ6 799 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 MRGPRX3Q96LB0 322 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 PPP1R16BQ96T49 567 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 TRIM55Q9BYV6 548 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 LRP2BPQ9P2M1 347 aa6.9□□□□□ -1.3
AC003001.1-201ENST00000443247 A0A1W2PQ27 194 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 A0A1W2PQ64 194 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 A0A1W2PQC6 194 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 A0A1W2PQD8 194 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 OR14I1A6ND48 311 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 TBX1O43435 398 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 ITGAVP06756 1048 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 ARL4AP40617 200 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 SCRN1Q12765 414 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 LAPTM5Q13571 262 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 RAB33AQ14088 237 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 SPOCD1Q6ZMY3 1216 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 CKAP2LQ8IYA6 745 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 BTN2A2Q8WVV5 523 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 PPP1R1BQ9UD71 204 aaPredicted RBP6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 ACSL6Q9UKU0 697 aa6.89□□□□□ -1.31
AC003001.1-201ENST00000443247 MSL3P1P0C860 447 aa6.88□□□□□ -1.31
AC003001.1-201ENST00000443247 GTF2F1P35269 517 aaKnown RBP eCLIP6.88□□□□□ -1.31
AC003001.1-201ENST00000443247 CYP4F8P98187 520 aa6.88□□□□□ -1.31
AC003001.1-201ENST00000443247 MVKQ03426 396 aa6.88□□□□□ -1.31
AC003001.1-201ENST00000443247 SLC10A6Q3KNW5 377 aa6.88□□□□□ -1.31
AC003001.1-201ENST00000443247 TSPAN15O95858 294 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 L1CAMP32004 1257 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 RAP1GAPP47736 663 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 COPS5Q92905 334 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 EPN3Q9H201 632 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 NKX2-4Q9H2Z4 354 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 TNFRSF12AQ9NP84 129 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 GPRC5CQ9NQ84 441 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 CLEC1BQ9P126 229 aa6.87□□□□□ -1.31
AC003001.1-201ENST00000443247 NPHP3-ACAD11A0A0J9YXS1 232 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 AGRPO00253 132 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 THBDP07204 575 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 PLS3P13797 630 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 PAMP19021 973 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 TACR1P25103 407 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 FBLN7Q53RD9 439 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 CPNE8Q86YQ8 564 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 SLC26A8Q96RN1 970 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 KRTAP4-2Q9BYR5 136 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 ZNF552Q9H707 407 aaPredicted RBP6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 CYP26B1Q9NR63 512 aa6.86□□□□□ -1.31
AC003001.1-201ENST00000443247 TRBV23OR9-2A0A075B6M9 112 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 MYOCOSA0A1B0GUC4 107 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 A0A1W2PQJ5 194 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 NUDT19A8MXV4 375 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 NFIBO00712 420 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 U2SURPO15042 1029 aaKnown RBP6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 MPOP05164 745 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 MCOLN1Q9GZU1 580 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 PDLIM7Q9NR12 457 aa6.85□□□□□ -1.31
AC003001.1-201ENST00000443247 PEX10O60683 326 aa6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 SNRPB2P08579 225 aaKnown RBP6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 TMEM253P0C7T8 217 aa6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 ECI1P42126 302 aa6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 CORO7P57737 925 aa6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 CYP4F3Q08477 520 aa6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 RAB3GAP1Q15042 981 aa6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 BICRALQ6AI39 1079 aa6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 NPM2Q86SE8 214 aaKnown RBP6.84□□□□□ -1.31
AC003001.1-201ENST00000443247 RWDD3Q9Y3V2 267 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms