RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 TMTC3Q6ZXV5 915 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP1-203ENST00000442679 FBXO11Q86XK2 927 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 CMTR1Q8N1G2 835 aaKnown RBP14.31□□□□□ -0.12
USP1-203ENST00000442679 CCDC82Q8N4S0 544 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 NPLOC4Q8TAT6 608 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 ARMC5Q96C12 935 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
USP1-203ENST00000442679 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
USP1-203ENST00000442679 PNMA6FA0A0J9YX94 578 aa14.3□□□□□ -0.12
USP1-203ENST00000442679 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP1-203ENST00000442679 EVCP57679 992 aa14.3□□□□□ -0.12
USP1-203ENST00000442679 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
USP1-203ENST00000442679 RRP36Q96EU6 259 aaKnown RBP14.3□□□□□ -0.12
USP1-203ENST00000442679 LARP6Q9BRS8 491 aaKnown RBP14.3□□□□□ -0.12
USP1-203ENST00000442679 AMNQ9BXJ7 453 aa14.3□□□□□ -0.12
USP1-203ENST00000442679 ALDH8A1Q9H2A2 487 aaPredicted RBP14.3□□□□□ -0.12
USP1-203ENST00000442679 ABCB11O95342 1321 aa14.3□□□□□ -0.12
USP1-203ENST00000442679 HTTP42858 3142 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 CCDC196A0A1B0GTZ2 297 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 CCDC85CA6NKD9 419 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 NFIBO00712 420 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 PPP1R11O60927 126 aaPredicted RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 HMGCRP04035 888 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 INHAP05111 366 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 PDIA3P30101 505 aaKnown RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 CDC27P30260 824 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 ADD1P35611 737 aaKnown RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 NEK4P51957 841 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 UBXN2AP68543 259 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 TRAF1Q13077 416 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 ZNF792Q3KQV3 632 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 NSMFQ6X4W1 530 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 TRIB2Q92519 343 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 ZNF274Q96GC6 653 aaPredicted RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 ZNF333Q96JL9 665 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 BACH2Q9BYV9 841 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 A1CFQ9NQ94 594 aaKnown RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 FAM217BQ9NTX9 383 aaPredicted RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 FLRT1Q9NZU1 646 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 MRPL11Q9Y3B7 192 aaKnown RBP14.29□□□□□ -0.12
USP1-203ENST00000442679 PCDHA1Q9Y5I3 950 aa14.29□□□□□ -0.12
USP1-203ENST00000442679 DNAJC25-GNG10A0A024R161 153 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 PFASO15067 1338 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 MYCP01106 439 aaPredicted RBP14.28□□□□□ -0.12
USP1-203ENST00000442679 TRIM32Q13049 653 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 BAATQ14032 418 aaPredicted RBP14.28□□□□□ -0.12
USP1-203ENST00000442679 ANKRD1Q15327 319 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 MFSD14CQ5VZR4 134 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 OLFML2BQ68BL8 750 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 RGS22Q8NE09 1264 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 MAML3Q96JK9 1138 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 CYP39A1Q9NYL5 469 aa14.28□□□□□ -0.12
USP1-203ENST00000442679 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
USP1-203ENST00000442679 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
USP1-203ENST00000442679 PLXNB2O15031 1838 aa14.27□□□□□ -0.12
USP1-203ENST00000442679 hCG_1642624A0A1W2PR95 340 aa14.27□□□□□ -0.13
USP1-203ENST00000442679 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
USP1-203ENST00000442679 AK2P54819 239 aa14.27□□□□□ -0.13
USP1-203ENST00000442679 CCT2P78371 535 aaKnown RBP14.27□□□□□ -0.13
USP1-203ENST00000442679 CNTN2Q02246 1040 aa14.27□□□□□ -0.13
USP1-203ENST00000442679 FUT2Q10981 343 aa14.27□□□□□ -0.13
USP1-203ENST00000442679 RNF207Q6ZRF8 634 aa14.27□□□□□ -0.13
USP1-203ENST00000442679 KIF2CQ99661 725 aa14.27□□□□□ -0.13
USP1-203ENST00000442679 NID2Q14112 1375 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 CCL5P13501 91 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 CALML3P27482 149 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 CYP2C19P33261 490 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 CACNB2Q08289 660 aaPredicted RBP14.26□□□□□ -0.13
USP1-203ENST00000442679 STK3Q13188 491 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 MTFR1Q15390 333 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 FAM133AQ8N9E0 248 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 TINF2Q9BSI4 451 aa14.26□□□□□ -0.13
USP1-203ENST00000442679 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
USP1-203ENST00000442679 V9GY48 417 aaPredicted RBP14.26□□□□□ -0.13
USP1-203ENST00000442679 ZNF236Q9UL36 1845 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 SOWAHBA6NEL2 793 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 IGHA2P01877 340 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
USP1-203ENST00000442679 RPS6P62753 249 aaKnown RBP14.25□□□□□ -0.13
USP1-203ENST00000442679 SLC30A10Q6XR72 485 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
USP1-203ENST00000442679 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
USP1-203ENST00000442679 PURBQ96QR8 312 aaKnown RBP14.25□□□□□ -0.13
USP1-203ENST00000442679 TMEM106CQ9BVX2 250 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 MAF1Q9H063 256 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 RNF208Q9H0X6 261 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 UNC93B1Q9H1C4 597 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 DOCK3Q8IZD9 2030 aa14.25□□□□□ -0.13
USP1-203ENST00000442679 RPTORQ8N122 1335 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms