RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ZNF662Q6ZS27 426 aa22.59■■□□□ 1.21
SHOX2-203ENST00000441443 RNPC3Q96LT9 517 aaKnown RBP22.59■■□□□ 1.21
SHOX2-203ENST00000441443 PURBQ96QR8 312 aaKnown RBP22.59■■□□□ 1.21
SHOX2-203ENST00000441443 PDS5AQ29RF7 1337 aaKnown RBP22.59■■□□□ 1.21
SHOX2-203ENST00000441443 RNF187Q5TA31 235 aaPredicted RBP22.59■■□□□ 1.21
SHOX2-203ENST00000441443 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
SHOX2-203ENST00000441443 PIK3AP1Q6ZUJ8 805 aa22.59■■□□□ 1.21
SHOX2-203ENST00000441443 ADSSL1Q8N142 457 aa22.59■■□□□ 1.21
SHOX2-203ENST00000441443 RMND1Q9NWS8 449 aa22.59■■□□□ 1.21
SHOX2-203ENST00000441443 MAGEC2Q9UBF1 373 aaPredicted RBP22.59■■□□□ 1.21
SHOX2-203ENST00000441443 BMP15O95972 392 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 EP400NLQ6ZTU2 488 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 TMTC2Q8N394 836 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
SHOX2-203ENST00000441443 TNKSO95271 1327 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 MINDY4BA8MYZ0 360 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 VAV2P52735 878 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 TBC1D8BQ0IIM8 1120 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 HAUS3Q68CZ6 603 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 MARCH10Q8NA82 808 aaPredicted RBP22.58■■□□□ 1.21
SHOX2-203ENST00000441443 PLIN2Q99541 437 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 TUBGCP2Q9BSJ2 902 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 STIM2Q9P246 746 aa22.58■■□□□ 1.21
SHOX2-203ENST00000441443 NCK2O43639 380 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 EPB41P11171 864 aaKnown RBP22.57■■□□□ 1.2
SHOX2-203ENST00000441443 SEC24CP53992 1094 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 CCDC181Q5TID7 509 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 TTYH3Q9C0H2 523 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 ERVV-1B6SEH8 477 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 ADAMTS3O15072 1205 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 LSP1P33241 339 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 DNM2P50570 870 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 PAPPAQ13219 1627 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 ALS2CLQ60I27 953 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 CCDC24Q8N4L8 307 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 CCDC42Q96M95 316 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 OSBPL9Q96SU4 736 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 EXOC1Q9NV70 894 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 LRP2BPQ9P2M1 347 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 SRGNP10124 158 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 EEF1GP26641 437 aaKnown RBP22.57■■□□□ 1.2
SHOX2-203ENST00000441443 STAT6P42226 847 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 SPA17Q15506 151 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 NPY5RQ15761 445 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 NAA35Q5VZE5 725 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 CEP83Q9Y592 693 aa22.57■■□□□ 1.2
SHOX2-203ENST00000441443 ESYT3A0FGR9 886 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 TACC1O75410 805 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 FSBPO95073 299 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 MAP3K12Q12852 859 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 EMBQ6PCB8 327 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 CCDC170Q8IYT3 715 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 TRIM58Q8NG06 486 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 CCDC43Q96MW1 224 aaKnown RBP22.56■■□□□ 1.2
SHOX2-203ENST00000441443 SUFUQ9UMX1 484 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 ITGB4P16144 1822 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 BAZ2BQ9UIF8 2168 aaKnown RBP22.56■■□□□ 1.2
SHOX2-203ENST00000441443 NKRFO15226 690 aaKnown RBP eCLIP22.56■■□□□ 1.2
SHOX2-203ENST00000441443 UQCRFS1P1P0C7P4 283 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 IGHMBP2P38935 993 aaKnown RBP22.56■■□□□ 1.2
SHOX2-203ENST00000441443 TYW1BQ6NUM6 668 aa22.56■■□□□ 1.2
SHOX2-203ENST00000441443 ZNF512BQ96KM6 892 aaPredicted RBP22.56■■□□□ 1.2
SHOX2-203ENST00000441443 ZSCAN5CA6NGD5 496 aaPredicted RBP22.55■■□□□ 1.2
SHOX2-203ENST00000441443 FAM153BP0C7A2 387 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 FAM153CQ494X1 144 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 ANKRD13CQ8N6S4 541 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 TNFRSF25Q93038 417 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 IFIH1Q9BYX4 1025 aaKnown RBP22.55■■□□□ 1.2
SHOX2-203ENST00000441443 NACAP1Q9BZK3 213 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 CENPHQ9H3R5 247 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 FAM153AQ9UHL3 310 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 NAP1L1P55209 391 aaKnown RBP22.55■■□□□ 1.2
SHOX2-203ENST00000441443 ZBED6P86452 979 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 FUT2Q10981 343 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 C8orf74Q6P047 294 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 RASSF8Q8NHQ8 419 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 RBM12Q9NTZ6 932 aaKnown RBP22.55■■□□□ 1.2
SHOX2-203ENST00000441443 ARID4AP29374 1257 aaPredicted RBP22.55■■□□□ 1.2
SHOX2-203ENST00000441443 IFT81Q8WYA0 676 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 NFU1Q9UMS0 254 aa22.55■■□□□ 1.2
SHOX2-203ENST00000441443 MROH5Q6ZUA9 1318 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 ZNF233A6NK53 670 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 CARSP49589 748 aaKnown RBP22.54■■□□□ 1.2
SHOX2-203ENST00000441443 CSGALNACT2Q8N6G5 542 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 ZNF473Q8WTR7 871 aaKnown RBP22.54■■□□□ 1.2
SHOX2-203ENST00000441443 MS4A14Q96JA4 679 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 MYH6P13533 1939 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 PP2D1A8MPX8 630 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 DNA2P51530 1060 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 ATP2B2Q01814 1243 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 SEC23AQ15436 765 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
SHOX2-203ENST00000441443 ZKSCAN4Q969J2 545 aaPredicted RBP22.54■■□□□ 1.2
SHOX2-203ENST00000441443 EPN3Q9H201 632 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 THAP9Q9H5L6 903 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 DONSONQ9NYP3 566 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 MYH10P35580 1976 aa22.54■■□□□ 1.2
SHOX2-203ENST00000441443 PRPF3O43395 683 aaKnown RBP22.53■■□□□ 1.2
SHOX2-203ENST00000441443 GUCY2FP51841 1108 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms