RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 C19orf47Q8N9M1 422 aaKnown RBP5.08□□□□□ -1.6
VPS8-208ENST00000441141 ANAPC16Q96DE5 110 aa5.08□□□□□ -1.6
VPS8-208ENST00000441141 BDH2Q9BUT1 245 aa5.08□□□□□ -1.6
VPS8-208ENST00000441141 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS8-208ENST00000441141 CNNM2Q9H8M5 875 aa5.08□□□□□ -1.6
VPS8-208ENST00000441141 KLHL14Q9P2G3 628 aa5.08□□□□□ -1.6
VPS8-208ENST00000441141 NUDT19A8MXV4 375 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 TNFRSF10CO14798 259 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 BUB1BO60566 1050 aaPredicted RBP5.07□□□□□ -1.6
VPS8-208ENST00000441141 NME1P15531 152 aaKnown RBP5.07□□□□□ -1.6
VPS8-208ENST00000441141 GUCY2CP25092 1073 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 GTF2F1P35269 517 aaKnown RBP eCLIP5.07□□□□□ -1.61e-7■■■■■ 30.9
VPS8-208ENST00000441141 CYP4F8P98187 520 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 EFEMP1Q12805 493 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 NBPF9Q3BBW0 867 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 HSF5Q4G112 596 aaPredicted RBP5.07□□□□□ -1.6
VPS8-208ENST00000441141 CCDC81Q6ZN84 652 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 UBXN4Q92575 508 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 SHDQ96IW2 340 aa5.07□□□□□ -1.6
VPS8-208ENST00000441141 GPR55Q9Y2T6 319 aaPredicted RBP5.07□□□□□ -1.6
VPS8-208ENST00000441141 FADS2P1A8MWK0 482 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 U2SURPO15042 1029 aaKnown RBP5.06□□□□□ -1.6
VPS8-208ENST00000441141 DNAJA2O60884 412 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 PRAMEF1O95521 474 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 PRKCAP17252 672 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 KCNC1P48547 511 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 NBPF6Q5VWK0 638 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 ZPBP2Q6X784 338 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 LSRQ86X29 649 aaPredicted RBP5.06□□□□□ -1.6
VPS8-208ENST00000441141 NBPF4Q96M43 638 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 PHAXQ9H814 394 aaKnown RBP5.06□□□□□ -1.6
VPS8-208ENST00000441141 PRKAG3Q9UGI9 489 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 PCDHA5Q9Y5H7 936 aa5.06□□□□□ -1.6
VPS8-208ENST00000441141 A0A1W2PQ45 241 aaPredicted RBP5.05□□□□□ -1.6
VPS8-208ENST00000441141 A0A1W2PQY0 241 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 SIGLEC6O43699 453 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 CLEC3AO75596 197 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 UBOX5O94941 541 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 PFKLP17858 780 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 NCKAP1LP55160 1127 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 CASP7P55210 303 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 PPP2R5EQ16537 467 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 NBPF12Q5TAG4 269 aaPredicted RBP5.05□□□□□ -1.6
VPS8-208ENST00000441141 SMARCC1Q92922 1105 aaPredicted RBP5.05□□□□□ -1.6
VPS8-208ENST00000441141 GPR20Q99678 358 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 CDADC1Q9BWV3 514 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 TRIM55Q9BYV6 548 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 USP35Q9P2H5 1018 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 PALD1Q9ULE6 856 aa5.05□□□□□ -1.6
VPS8-208ENST00000441141 A0A1W2PQ27 194 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 A0A1W2PQ64 194 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 A0A1W2PQC6 194 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 A0A1W2PQD8 194 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 INSRRP14616 1297 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 CAP1Q01518 475 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 CBX2Q14781 532 aaPredicted RBP5.04□□□□□ -1.6
VPS8-208ENST00000441141 KIR3DS1Q14943 382 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 TP53I13Q8NBR0 393 aaPredicted RBP5.04□□□□□ -1.6
VPS8-208ENST00000441141 NUP43Q8NFH3 380 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 PRDM14Q9GZV8 571 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 ZNF408Q9H9D4 720 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 CHST7Q9NS84 486 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 ACTR10Q9NZ32 417 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 CNOT11Q9UKZ1 510 aaKnown RBP5.04□□□□□ -1.6
VPS8-208ENST00000441141 MRVI1Q9Y6F6 885 aa5.04□□□□□ -1.6
VPS8-208ENST00000441141 K7ESM1 405 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 SMAD7O15105 426 aaKnown RBP5.03□□□□□ -1.6
VPS8-208ENST00000441141 NAT2P11245 290 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 ETFBP38117 255 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 SLURP1P55000 103 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 SNW1Q13573 536 aaKnown RBP5.03□□□□□ -1.6
VPS8-208ENST00000441141 PUM1Q14671 1186 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS8-208ENST00000441141 NR1I3Q14994 352 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 RTP5Q14D33 572 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 TARBP2Q15633 366 aaKnown RBP5.03□□□□□ -1.6
VPS8-208ENST00000441141 FXNQ16595 210 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 ZC3H14Q6PJT7 736 aaKnown RBP5.03□□□□□ -1.6
VPS8-208ENST00000441141 RPTNQ6XPR3 784 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 ANKS3Q6ZW76 656 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 SLCO6A1Q86UG4 719 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 SLC9A7Q96T83 725 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 ANTXR1Q9H6X2 564 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 TNFRSF12AQ9NP84 129 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 USP40Q9NVE5 1235 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 ERVK13-1Q9NX77 482 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 ACSL6Q9UKU0 697 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 MYRFQ9Y2G1 1151 aa5.03□□□□□ -1.6
VPS8-208ENST00000441141 FFAR3O14843 346 aa5.02□□□□□ -1.61
VPS8-208ENST00000441141 MAPKAPK2P49137 400 aa5.02□□□□□ -1.61
VPS8-208ENST00000441141 PMS1P54277 932 aaKnown RBP5.02□□□□□ -1.61
VPS8-208ENST00000441141 ZNF200P98182 395 aaPredicted RBP5.02□□□□□ -1.61
VPS8-208ENST00000441141 RBL2Q08999 1139 aa5.02□□□□□ -1.61
VPS8-208ENST00000441141 NCAPHQ15003 741 aa5.02□□□□□ -1.61
VPS8-208ENST00000441141 PLEKHN1Q494U1 663 aaPredicted RBP5.02□□□□□ -1.61
VPS8-208ENST00000441141 ZFYVE27Q5T4F4 411 aa5.02□□□□□ -1.61
VPS8-208ENST00000441141 HHIPL2Q6UWX4 724 aa5.02□□□□□ -1.61
VPS8-208ENST00000441141 UNC5AQ6ZN44 842 aa5.02□□□□□ -1.61
VPS8-208ENST00000441141 SUCOQ9UBS9 1254 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms