RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 SAT1P21673 171 aa18.85■□□□□ 0.61
PTPRF-209ENST00000438120 ODR4Q5SWX8 454 aa18.85■□□□□ 0.61
PTPRF-209ENST00000438120 MAIP1Q8WWC4 291 aa18.85■□□□□ 0.61
PTPRF-209ENST00000438120 CCDC51Q96ER9 411 aa18.85■□□□□ 0.61
PTPRF-209ENST00000438120 SEPT9Q9UHD8 586 aaPredicted RBP18.85■□□□□ 0.61
PTPRF-209ENST00000438120 LRRC41Q15345 812 aa18.85■□□□□ 0.61
PTPRF-209ENST00000438120 UBE3CQ15386 1083 aa18.85■□□□□ 0.61
PTPRF-209ENST00000438120 FAM196AQ6ZSG2 479 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 QTRT2Q9H974 415 aaKnown RBP18.84■□□□□ 0.61
PTPRF-209ENST00000438120 KCNG1Q9UIX4 513 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 BUB1BO60566 1050 aaPredicted RBP18.84■□□□□ 0.61
PTPRF-209ENST00000438120 STX2P32856 288 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 PIK3CAP42336 1068 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 Q3C1V9 767 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 NME8Q8N427 588 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 PLCB1Q9NQ66 1216 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 LARSQ9P2J5 1176 aaKnown RBP18.84■□□□□ 0.61
PTPRF-209ENST00000438120 XDHP47989 1333 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 MYOM2P54296 1465 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 INSRP06213 1382 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 CSPG5O95196 566 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 C4orf50Q6ZRC1 276 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 HYOU1Q9Y4L1 999 aa18.84■□□□□ 0.61
PTPRF-209ENST00000438120 PALM3A6NDB9 673 aaPredicted RBP18.83■□□□□ 0.61
PTPRF-209ENST00000438120 CACNA2D3Q8IZS8 1091 aa18.83■□□□□ 0.61
PTPRF-209ENST00000438120 CYP21A2P08686 494 aa18.83■□□□□ 0.61
PTPRF-209ENST00000438120 PPFIA1Q13136 1202 aa18.83■□□□□ 0.61
PTPRF-209ENST00000438120 LRCH2Q5VUJ6 765 aa18.83■□□□□ 0.61
PTPRF-209ENST00000438120 CNKSR1Q969H4 720 aa18.83■□□□□ 0.61
PTPRF-209ENST00000438120 COPRSQ9NQ92 184 aa18.83■□□□□ 0.61
PTPRF-209ENST00000438120 CUL4BQ13620 913 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 SRGAP1Q7Z6B7 1085 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 HADHQ16836 314 aaKnown RBP18.83■□□□□ 0.6
PTPRF-209ENST00000438120 ANKRD20A3Q5VUR7 823 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 GRAMD1CQ8IYS0 662 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 DISC1Q9NRI5 854 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 CD2APQ9Y5K6 639 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 ATP1A2P50993 1020 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 FAM193BQ96PV7 902 aaPredicted RBP18.83■□□□□ 0.6
PTPRF-209ENST00000438120 STK38LQ9Y2H1 464 aa18.83■□□□□ 0.6
PTPRF-209ENST00000438120 TXNDC9O14530 226 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 ZMYM1Q5SVZ6 1142 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 CCDC13Q8IYE1 715 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 MAP4K1Q92918 833 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 PLEKHF1Q96S99 279 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 HESX1Q9UBX0 185 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 RASSF7Q02833 373 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 SPATA1Q5VX52 437 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 CNOT6LQ96LI5 555 aaKnown RBP18.82■□□□□ 0.6
PTPRF-209ENST00000438120 FTOQ9C0B1 505 aaKnown RBP eCLIP18.82■□□□□ 0.6
PTPRF-209ENST00000438120 RIC8AQ9NPQ8 531 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 LONP1P36776 959 aaKnown RBP18.82■□□□□ 0.6
PTPRF-209ENST00000438120 MEIS1O00470 390 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 SERPINB2P05120 415 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 FBXO18Q8NFZ0 1043 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 GOLGA5Q8TBA6 731 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 AMNQ9BXJ7 453 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 PARP2Q9UGN5 583 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 GBP1P32455 592 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 LCORLQ8N3X6 602 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 ZNF577Q9BSK1 485 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
PTPRF-209ENST00000438120 HNRNPDLO14979 420 aaKnown RBP18.81■□□□□ 0.6
PTPRF-209ENST00000438120 OATP04181 439 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 TMOD1P28289 359 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 NLGN1Q8N2Q7 840 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 ATP2A3Q93084 1043 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 PTPN22Q9Y2R2 807 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 CYP2D7A0A087X1C5 515 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 CDC25AP30304 524 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 TMCO4Q5TGY1 634 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 GALNT17Q6IS24 598 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 CROCCP2Q86T23 111 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 LRRC8AQ8IWT6 810 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 NRBP2Q9NSY0 501 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 FEZ2Q9UHY8 353 aaPredicted RBP18.81■□□□□ 0.6
PTPRF-209ENST00000438120 CASP14P31944 242 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 NXNQ6DKJ4 435 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 APOA5Q6Q788 366 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 IQCDQ96DY2 449 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 PIGSQ96S52 555 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
PTPRF-209ENST00000438120 EXOC3L4Q17RC7 722 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 COA7Q96BR5 231 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 PCDHA5Q9Y5H7 936 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 EHHADHQ08426 723 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 WHAMMP3Q1A5X7 153 aa18.81■□□□□ 0.6
PTPRF-209ENST00000438120 GPR101Q96P66 508 aaPredicted RBP18.81■□□□□ 0.6
PTPRF-209ENST00000438120 N4BP1O75113 896 aaKnown RBP18.8■□□□□ 0.6
PTPRF-209ENST00000438120 COPB1P53618 953 aaKnown RBP18.8■□□□□ 0.6
PTPRF-209ENST00000438120 DPP9Q86TI2 863 aa18.8■□□□□ 0.6
PTPRF-209ENST00000438120 DYNLL2Q96FJ2 89 aa18.8■□□□□ 0.6
PTPRF-209ENST00000438120 MYL7Q01449 175 aa18.8■□□□□ 0.6
PTPRF-209ENST00000438120 PUS7LQ9H0K6 701 aaKnown RBP18.8■□□□□ 0.6
PTPRF-209ENST00000438120 PCIF1Q9H4Z3 704 aa18.8■□□□□ 0.6
PTPRF-209ENST00000438120 BCL2L12Q9HB09 334 aa18.8■□□□□ 0.6
PTPRF-209ENST00000438120 PCDHA4Q9UN74 947 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms