RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 ZNF598Q86UK7 904 aaKnown RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 FAM186BQ8IYM0 893 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 SPARTQ8N0X7 666 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 GOLM1Q8NBJ4 401 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 CFAP36Q96G28 342 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 COG3Q96JB2 828 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 CEP295NLQ96MC4 621 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 JAKMIP1Q96N16 626 aaKnown RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 PSKH2Q96QS6 385 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 DCTPP1Q9H773 170 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 SPC25Q9HBM1 224 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 GPR108Q9NPR9 543 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 CASS4Q9NQ75 786 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 RAB21Q9UL25 225 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 L1RE1Q9UN81 338 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 NSFL1CQ9UNZ2 370 aaKnown RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 SCAF8Q9UPN6 1271 aaKnown RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 GJA3Q9Y6H8 435 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 PLB1Q6P1J6 1458 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 ARPC4-TTLL3A0A0A6YYG9 625 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 C19orf81C9J6K1 198 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 IDH3BO43837 385 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 KCNJ13O60928 360 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 PORP16435 677 aaPredicted RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 NFKBIAP25963 317 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 XRCC4Q13426 336 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 NDUFA5Q16718 116 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 SHROOM1Q2M3G4 852 aaPredicted RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 C15orf59Q2T9L4 293 aaPredicted RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 TTC39BQ5VTQ0 682 aaPredicted RBP7.17□□□□□ -1.26
MCF2-205ENST00000437564 ARHGEF18Q6ZSZ5 1173 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 NUP58Q9BVL2 599 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 OSBPL1AQ9BXW6 950 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 MIS12Q9H081 205 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 VCXQ9H320 206 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 CDHR5Q9HBB8 845 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 SNRKQ9NRH2 765 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 KCTD5Q9NXV2 234 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 CNPY2Q9Y2B0 182 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 KIF24Q5T7B8 1368 aa7.17□□□□□ -1.26
MCF2-205ENST00000437564 KIF21AQ7Z4S6 1674 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 KIF21BO75037 1637 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 CPLX1O14810 134 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 ASAP2O43150 1006 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 TRPA1O75762 1119 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 ATG7O95352 703 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 S100A6P06703 90 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 WEE1P30291 646 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 HSPA4P34932 840 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 GNL1P36915 607 aaPredicted RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 NLRP12P59046 1061 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 B2MP61769 119 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 ETF1P62495 437 aaKnown RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 GPSM2P81274 684 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 MYO1EQ12965 1108 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 BNIP1Q12981 228 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 SPATA1Q5VX52 437 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 LVRNQ6Q4G3 990 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 DPH6Q7L8W6 267 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 PHLDB2Q86SQ0 1253 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 MCF2L2Q86YR7 1114 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 CASP10Q92851 521 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 GFM2Q969S9 779 aaKnown RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 ITPKCQ96DU7 683 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 ZNF496Q96IT1 587 aaPredicted RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 CLMNQ96JQ2 1002 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 FGD4Q96M96 766 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 CATSPER2Q96P56 530 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 PRPF18Q99633 342 aaKnown RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 BPIFA3Q9BQP9 254 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 NAA15Q9BXJ9 866 aaKnown RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 OSBPL5Q9H0X9 879 aaPredicted RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 PLEKHA4Q9H4M7 779 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 CYLDQ9NQC7 956 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 KMT5AQ9NQR1 393 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 TCP11L1Q9NUJ3 509 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 RMND1Q9NWS8 449 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 PRR12Q9ULL5 1215 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 BOLA1Q9Y3E2 137 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 ZNF330Q9Y3S2 320 aaPredicted RBP7.16□□□□□ -1.26
MCF2-205ENST00000437564 HFM1A2PYH4 1435 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 CDHR2Q9BYE9 1310 aa7.16□□□□□ -1.26
MCF2-205ENST00000437564 E9PMD0 336 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 TNFRSF10AO00220 468 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 WNT7AO00755 349 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 MUSKO15146 869 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 AP5Z1O43299 807 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 TACC1O75410 805 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 ANP32DO95626 131 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 FGAP02671 866 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 KRT4P19013 534 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 CETN2P41208 172 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 HSPA14Q0VDF9 509 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 TUBB2AQ13885 445 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 ACAP1Q15027 740 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 BBS9Q3SYG4 887 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 LMBRD2Q68DH5 695 aaPredicted RBP7.15□□□□□ -1.26
MCF2-205ENST00000437564 ALKBH2Q6NS38 261 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms