RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 DDTLA6NHG4 134 aaPredicted RBP21.05■□□□□ 0.96
FAM3A-212ENST00000434658 ZNF18P17022 549 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 NLRP5P59047 1200 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 SYCP1Q15431 976 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 NOM1Q5C9Z4 860 aaKnown RBP21.05■□□□□ 0.96
FAM3A-212ENST00000434658 SYMPKQ92797 1274 aaKnown RBP21.05■□□□□ 0.96
FAM3A-212ENST00000434658 DHX58Q96C10 678 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 KLRG1Q96E93 195 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 EPSTI1Q96J88 318 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 SH3GLB2Q9NR46 395 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 IL17RBQ9NRM6 502 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 TCP11L1Q9NUJ3 509 aa21.05■□□□□ 0.96
FAM3A-212ENST00000434658 CALML3P27482 149 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 ERCC5P28715 1186 aaPredicted RBP21.04■□□□□ 0.96
FAM3A-212ENST00000434658 PLCD1P51178 756 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 ZNF174Q15697 407 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 E4F1Q66K89 784 aaPredicted RBP21.04■□□□□ 0.96
FAM3A-212ENST00000434658 CYP4F22Q6NT55 531 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 RGMBQ6NW40 437 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 MIGA2Q7L4E1 593 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 AMOTL1Q8IY63 956 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 CCDC112Q8NEF3 446 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 CSRNP1Q96S65 589 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 FLT1P17948 1338 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 IREB2P48200 963 aaKnown RBP21.04■□□□□ 0.96
FAM3A-212ENST00000434658 VEGFBP49765 207 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 GRM1Q13255 1194 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 GRM4Q14833 912 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 PNMA1Q8ND90 353 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 TRMT1Q9NXH9 659 aaKnown RBP21.04■□□□□ 0.96
FAM3A-212ENST00000434658 SAP30BPQ9UHR5 308 aaKnown RBP21.04■□□□□ 0.96
FAM3A-212ENST00000434658 NFE2L3Q9Y4A8 694 aa21.04■□□□□ 0.96
FAM3A-212ENST00000434658 MYH1P12882 1939 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 GNAQP50148 359 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 ZNF157P51786 506 aaPredicted RBP21.03■□□□□ 0.96
FAM3A-212ENST00000434658 PTGDRQ13258 359 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 SLC4A8Q2Y0W8 1093 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 LDLRAD1Q5T700 205 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 DCAF15Q66K64 600 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 ANKRD7Q92527 254 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 PAGE5Q96GU1 130 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 INTS13Q9NVM9 706 aa21.03■□□□□ 0.96
FAM3A-212ENST00000434658 PIK3AP1Q6ZUJ8 805 aa21.02■□□□□ 0.96
FAM3A-212ENST00000434658 DYNLL2Q96FJ2 89 aa21.02■□□□□ 0.96
FAM3A-212ENST00000434658 CAPNS2Q96L46 248 aa21.02■□□□□ 0.96
FAM3A-212ENST00000434658 TMX1Q9H3N1 280 aa21.02■□□□□ 0.96
FAM3A-212ENST00000434658 TOP1P11387 765 aaKnown RBP21.01■□□□□ 0.95
FAM3A-212ENST00000434658 ECE1P42892 770 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 PPP1R13BQ96KQ4 1090 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 MKNK2Q9HBH9 465 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 ATRNL1Q5VV63 1379 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 TMEM232C9JQI7 657 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 DPYDQ12882 1025 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 GSDMAQ96QA5 445 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 MED15Q96RN5 788 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 PYM1Q9BRP8 204 aaKnown RBP21.01■□□□□ 0.95
FAM3A-212ENST00000434658 ZNF341Q9BYN7 854 aa21.01■□□□□ 0.95
FAM3A-212ENST00000434658 VWA3AA6NCI4 1184 aa21■□□□□ 0.95
FAM3A-212ENST00000434658 TBX2Q13207 712 aaPredicted RBP21■□□□□ 0.95
FAM3A-212ENST00000434658 BLIDQ8IZY5 108 aa21■□□□□ 0.95
FAM3A-212ENST00000434658 ZNF592Q92610 1267 aa21■□□□□ 0.95
FAM3A-212ENST00000434658 DHX36Q9H2U1 1008 aaKnown RBP21■□□□□ 0.95
FAM3A-212ENST00000434658 CCP110O43303 1012 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 TUBB4AP04350 444 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 MAP3K9P80192 1104 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 ARL6IP4Q66PJ3 421 aaKnown RBP20.99■□□□□ 0.95
FAM3A-212ENST00000434658 TRMT44Q8IYL2 757 aaKnown RBP20.99■□□□□ 0.95
FAM3A-212ENST00000434658 ANKRD13AQ8IZ07 590 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 KIF18AQ8NI77 898 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 CCDC102AQ96A19 550 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 MAD2L2Q9UI95 211 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 PCDHA4Q9UN74 947 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 COL2A1P02458 1487 aaPredicted RBP20.99■□□□□ 0.95
FAM3A-212ENST00000434658 UNCXA6NJT0 531 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 TSPY3P0CV98 308 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 TSPY8P0CW00 308 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 SLURP2P0DP57 97 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 E2F4Q16254 413 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 ZNF444Q8N0Y2 327 aaPredicted RBP20.99■□□□□ 0.95
FAM3A-212ENST00000434658 FAM177A1Q8N128 213 aaPredicted RBP20.99■□□□□ 0.95
FAM3A-212ENST00000434658 STAG2Q8N3U4 1231 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.99■□□□□ 0.951e-8■■■□□ 17.1
FAM3A-212ENST00000434658 SLC10A4Q96EP9 437 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 CLMNQ96JQ2 1002 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 ZNF287Q9HBT7 754 aa20.99■□□□□ 0.95
FAM3A-212ENST00000434658 ADAMTS3O15072 1205 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 RASA1P20936 1047 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 AFMP43652 599 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 CUL4BQ13620 913 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 IQUBQ8NA54 791 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 DAGLBQ8NCG7 672 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 WRNIP1Q96S55 665 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 PI4KBQ9UBF8 816 aa20.98■□□□□ 0.95
FAM3A-212ENST00000434658 FAM155AB1AL88 458 aaPredicted RBP20.97■□□□□ 0.95
FAM3A-212ENST00000434658 M0R2N6 131 aa20.97■□□□□ 0.95
FAM3A-212ENST00000434658 CDK11BP21127 795 aaKnown RBP20.97■□□□□ 0.95
FAM3A-212ENST00000434658 MAP3K10Q02779 954 aa20.97■□□□□ 0.95
FAM3A-212ENST00000434658 NCBP1Q09161 790 aaKnown RBP20.97■□□□□ 0.95
FAM3A-212ENST00000434658 GALNT17Q6IS24 598 aa20.97■□□□□ 0.95
FAM3A-212ENST00000434658 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms