RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 MCMBPQ9BTE3 642 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 RNF32Q9H0A6 362 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 NKX2-4Q9H2Z4 354 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 GPR160Q9UJ42 338 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 GPR55Q9Y2T6 319 aaPredicted RBP5.32□□□□□ -1.56
LINC01239-201ENST00000433645 TAF6LQ9Y6J9 622 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 PSPNO60542 156 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 VAMP4O75379 141 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 CPP00450 1065 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 ITGAVP06756 1048 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 SERINC3Q13530 473 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 RASGRF1Q13972 1273 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 ZNF227Q86WZ6 799 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 INTS4Q96HW7 963 aaKnown RBP5.31□□□□□ -1.56
LINC01239-201ENST00000433645 MMP19Q99542 508 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 C19orf44Q9H6X5 657 aa5.31□□□□□ -1.56
LINC01239-201ENST00000433645 LRRC10BA6NIK2 292 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 KCNH1O95259 989 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 PAMP19021 973 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 L1CAMP32004 1257 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 TRHRP34981 398 aaPredicted RBP5.3□□□□□ -1.56
LINC01239-201ENST00000433645 ARL4AP40617 200 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 ERVFRD-1P60508 538 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 E4F1Q66K89 784 aaPredicted RBP5.3□□□□□ -1.56
LINC01239-201ENST00000433645 MPZL3Q6UWV2 235 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 JAMLQ86YT9 394 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 LRRC47Q8N1G4 583 aaKnown RBP5.3□□□□□ -1.56
LINC01239-201ENST00000433645 DRC1Q96MC2 740 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 JMJD8Q96S16 334 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 ST7Q9NRC1 585 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.3□□□□□ -1.56
LINC01239-201ENST00000433645 LRP2BPQ9P2M1 347 aa5.3□□□□□ -1.56
LINC01239-201ENST00000433645 PPP1R1BQ9UD71 204 aaPredicted RBP5.3□□□□□ -1.56
LINC01239-201ENST00000433645 STXBP3O00186 592 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 ABLIM1O14639 778 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 PDPK1O15530 556 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 PEX10O60683 326 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 FARP2O94887 1054 aaPredicted RBP5.29□□□□□ -1.56
LINC01239-201ENST00000433645 TMEM62Q0P6H9 643 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 SCRN1Q12765 414 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 DPY19L1Q2PZI1 675 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 ACBD5Q5T8D3 534 aaPredicted RBP5.29□□□□□ -1.56
LINC01239-201ENST00000433645 PPP1R14AQ96A00 147 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 LIN37Q96GY3 246 aaPredicted RBP5.29□□□□□ -1.56
LINC01239-201ENST00000433645 FAM84AQ96KN4 292 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 PLCD4Q9BRC7 762 aa5.29□□□□□ -1.56
LINC01239-201ENST00000433645 ZNF552Q9H707 407 aaPredicted RBP5.29□□□□□ -1.56
LINC01239-201ENST00000433645 NPHP3-ACAD11A0A0J9YXS1 232 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 A0A1W2PQU0 124 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 OR14I1A6ND48 311 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 FGFR1P11362 822 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 CYP4F8P98187 520 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 MESP2Q0VG99 397 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 MAP4K2Q12851 820 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 HSP90AA2PQ14568 343 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-201ENST00000433645 CBX2Q14781 532 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-201ENST00000433645 LONRF2Q1L5Z9 754 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 OLFML2BQ68BL8 750 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 OGFOD2Q6N063 350 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 FBXO15Q8NCQ5 510 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-201ENST00000433645 NPLOC4Q8TAT6 608 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 UBXN4Q92575 508 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 SLC26A8Q96RN1 970 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 EPB41L4BQ9H329 900 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 TNFRSF12AQ9NP84 129 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 PDLIM7Q9NR12 457 aa5.28□□□□□ -1.56
LINC01239-201ENST00000433645 A0A1W2PQ27 194 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 A0A1W2PQ64 194 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 A0A1W2PQC6 194 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 A0A1W2PQD8 194 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 SRGAP3O43295 1099 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 EFEMP2O95967 443 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 MPOP05164 745 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 PRKCAP17252 672 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 GFRA1P56159 465 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 PPP2R2AP63151 447 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 YBX1P67809 324 aaKnown RBP5.27□□□□□ -1.57
LINC01239-201ENST00000433645 MVKQ03426 396 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 CYP4F3Q08477 520 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 KCNAB2Q13303 367 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 NR1I3Q14994 352 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 MLANAQ16655 118 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 ZC3H12BQ5HYM0 836 aaKnown RBP5.27□□□□□ -1.57
LINC01239-201ENST00000433645 PRR23BQ6ZRT6 265 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 NUP43Q8NFH3 380 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 FRS2Q8WU20 508 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 BTN2A2Q8WVV5 523 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 PPP1R16BQ96T49 567 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 IMPACTQ9P2X3 320 aa5.27□□□□□ -1.57
LINC01239-201ENST00000433645 NPHS1O60500 1241 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 SEMA7AO75326 666 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 THBDP07204 575 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 PLS3P13797 630 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 GTF2A2P52657 109 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 RASA3Q14644 834 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 SLC35F1Q5T1Q4 408 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 KREMEN2Q8NCW0 462 aa5.26□□□□□ -1.57
LINC01239-201ENST00000433645 KCTD13Q8WZ19 329 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms