RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NOSTRINQ8IVI9 506 aa30.37■■■□□ 2.45
TMEM248-205ENST00000433271 CREBZFQ9NS37 354 aa30.37■■■□□ 2.45
TMEM248-205ENST00000433271 M0R2N6 131 aa30.36■■■□□ 2.45
TMEM248-205ENST00000433271 HERVK_113P62684 666 aa30.36■■■□□ 2.45
TMEM248-205ENST00000433271 CUL5Q93034 780 aa30.36■■■□□ 2.45
TMEM248-205ENST00000433271 ZNF214Q9UL59 606 aaPredicted RBP30.36■■■□□ 2.45
TMEM248-205ENST00000433271 MRPL11Q9Y3B7 192 aaKnown RBP30.36■■■□□ 2.45
TMEM248-205ENST00000433271 PDHXO00330 501 aa30.36■■■□□ 2.45
TMEM248-205ENST00000433271 TMEM132BQ14DG7 1078 aa30.36■■■□□ 2.45
TMEM248-205ENST00000433271 ADAMTS3O15072 1205 aa30.35■■■□□ 2.45
TMEM248-205ENST00000433271 INHBEP58166 350 aa30.35■■■□□ 2.45
TMEM248-205ENST00000433271 CLEC17AQ6ZS10 378 aa30.35■■■□□ 2.45
TMEM248-205ENST00000433271 TEX2Q8IWB9 1127 aa30.35■■■□□ 2.45
TMEM248-205ENST00000433271 TNFRSF25Q93038 417 aa30.35■■■□□ 2.45
TMEM248-205ENST00000433271 PTPN18Q99952 460 aa30.35■■■□□ 2.45
TMEM248-205ENST00000433271 TAL1P17542 331 aaPredicted RBP30.34■■■□□ 2.45
TMEM248-205ENST00000433271 POTEEQ6S8J3 1075 aa30.34■■■□□ 2.45
TMEM248-205ENST00000433271 FOXD4L6Q3SYB3 417 aaPredicted RBP30.33■■■□□ 2.45
TMEM248-205ENST00000433271 FOXD4L3Q6VB84 417 aaPredicted RBP30.33■■■□□ 2.45
TMEM248-205ENST00000433271 REXO1Q8N1G1 1221 aaKnown RBP30.33■■■□□ 2.45
TMEM248-205ENST00000433271 FAM43AQ8N2R8 423 aa30.33■■■□□ 2.45
TMEM248-205ENST00000433271 TEX13BQ9BXU2 312 aa30.33■■■□□ 2.45
TMEM248-205ENST00000433271 PCDHA6Q9UN73 950 aa30.33■■■□□ 2.45
TMEM248-205ENST00000433271 PCDHA8Q9Y5H6 950 aa30.33■■■□□ 2.45
TMEM248-205ENST00000433271 SMCHD1A6NHR9 2005 aa30.33■■■□□ 2.45
TMEM248-205ENST00000433271 OPLAHO14841 1288 aa30.33■■■□□ 2.45
TMEM248-205ENST00000433271 FAM173BQ6P4H8 233 aa30.33■■■□□ 2.45
TMEM248-205ENST00000433271 GTF3C2Q8WUA4 911 aaPredicted RBP30.33■■■□□ 2.45
TMEM248-205ENST00000433271 COL11A1P12107 1806 aaPredicted RBP30.32■■■□□ 2.44
TMEM248-205ENST00000433271 ALAS1P13196 640 aa30.32■■■□□ 2.44
TMEM248-205ENST00000433271 STAT3P40763 770 aa30.32■■■□□ 2.44
TMEM248-205ENST00000433271 SNRNP48Q6IEG0 339 aaKnown RBP30.32■■■□□ 2.44
TMEM248-205ENST00000433271 RASSF10A6NK89 507 aa30.31■■■□□ 2.44
TMEM248-205ENST00000433271 MYSM1Q5VVJ2 828 aa30.31■■■□□ 2.44
TMEM248-205ENST00000433271 ZCCHC17Q9NP64 241 aaKnown RBP30.31■■■□□ 2.44
TMEM248-205ENST00000433271 BTBD7Q9P203 1132 aa30.31■■■□□ 2.44
TMEM248-205ENST00000433271 A0A0G2JMZ2 1700 aa30.31■■■□□ 2.44
TMEM248-205ENST00000433271 BAG4O95429 457 aaKnown RBP30.3■■■□□ 2.44
TMEM248-205ENST00000433271 CYP2C8P10632 490 aa30.3■■■□□ 2.44
TMEM248-205ENST00000433271 CLK2P49760 499 aaKnown RBP30.3■■■□□ 2.44
TMEM248-205ENST00000433271 TKFCQ3LXA3 575 aa30.3■■■□□ 2.44
TMEM248-205ENST00000433271 RASGRP4Q8TDF6 673 aa30.3■■■□□ 2.44
TMEM248-205ENST00000433271 CLEC4DQ8WXI8 215 aa30.3■■■□□ 2.44
TMEM248-205ENST00000433271 GBP4Q96PP9 640 aa30.3■■■□□ 2.44
TMEM248-205ENST00000433271 BIN2Q9UBW5 565 aaPredicted RBP30.3■■■□□ 2.44
TMEM248-205ENST00000433271 RABGAP1Q9Y3P9 1069 aa30.3■■■□□ 2.44
TMEM248-205ENST00000433271 PIK3CDO00329 1044 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 MEIS2O14770 477 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 DNM1Q05193 864 aaKnown RBP30.29■■■□□ 2.44
TMEM248-205ENST00000433271 PLS1Q14651 629 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 DEFB115Q30KQ5 88 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 ATL3Q6DD88 541 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 PAXIP1Q6ZW49 1069 aaPredicted RBP30.29■■■□□ 2.44
TMEM248-205ENST00000433271 TRERF1Q96PN7 1200 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 RBPJLQ9UBG7 517 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 RIPK3Q9Y572 518 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 CCDC194A0A1B0GVG4 234 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 SREBF2Q12772 1141 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 EARS2Q5JPH6 523 aaKnown RBP30.29■■■□□ 2.44
TMEM248-205ENST00000433271 CYP4F22Q6NT55 531 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 USP17L6PQ6QN14 398 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 KRT25Q7Z3Z0 450 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 MCF2L2Q86YR7 1114 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 SMCR8Q8TEV9 937 aaPredicted RBP30.29■■■□□ 2.44
TMEM248-205ENST00000433271 CHAMP1Q96JM3 812 aa30.29■■■□□ 2.44
TMEM248-205ENST00000433271 PARK7Q99497 189 aaKnown RBP30.29■■■□□ 2.44
TMEM248-205ENST00000433271 UBE2SQ16763 222 aa30.28■■■□□ 2.44
TMEM248-205ENST00000433271 MCTP2Q6DN12 878 aa30.28■■■□□ 2.44
TMEM248-205ENST00000433271 PIK3AP1Q6ZUJ8 805 aa30.28■■■□□ 2.44
TMEM248-205ENST00000433271 ZNF396Q96N95 335 aaPredicted RBP30.28■■■□□ 2.44
TMEM248-205ENST00000433271 SPATC1LQ9H0A9 340 aa30.28■■■□□ 2.44
TMEM248-205ENST00000433271 HOMER2Q9NSB8 354 aa30.28■■■□□ 2.44
TMEM248-205ENST00000433271 CNMDO75829 334 aa30.27■■■□□ 2.44
TMEM248-205ENST00000433271 NOM1Q5C9Z4 860 aaKnown RBP30.27■■■□□ 2.44
TMEM248-205ENST00000433271 RILPL1Q5EBL4 403 aa30.27■■■□□ 2.44
TMEM248-205ENST00000433271 JAKMIP3Q5VZ66 844 aa30.27■■■□□ 2.44
TMEM248-205ENST00000433271 SAMD3Q8N6K7 520 aa30.27■■■□□ 2.44
TMEM248-205ENST00000433271 PAGR1Q9BTK6 254 aa30.27■■■□□ 2.44
TMEM248-205ENST00000433271 RNF146Q9NTX7 359 aa30.27■■■□□ 2.44
TMEM248-205ENST00000433271 TMEM260Q9NX78 707 aa30.27■■■□□ 2.44
TMEM248-205ENST00000433271 GCOM1H8Y6P7 765 aaPredicted RBP30.26■■■□□ 2.44
TMEM248-205ENST00000433271 IGF2BP3O00425 579 aaKnown RBP eCLIP30.26■■■□□ 2.449e-6■■■□□ 18
TMEM248-205ENST00000433271 POLR2MP0CAP2 368 aa30.26■■■□□ 2.44
TMEM248-205ENST00000433271 GCLCP48506 637 aaPredicted RBP30.26■■■□□ 2.44
TMEM248-205ENST00000433271 MUM1L1Q5H9M0 696 aa30.26■■■□□ 2.44
TMEM248-205ENST00000433271 IFNL1Q8IU54 200 aa30.26■■■□□ 2.44
TMEM248-205ENST00000433271 RIOX2Q8IUF8 465 aa30.26■■■□□ 2.44
TMEM248-205ENST00000433271 TXNRD2Q9NNW7 524 aa30.26■■■□□ 2.44
TMEM248-205ENST00000433271 FAM205CA6NFA0 338 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 NFIBO00712 420 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 CFBP00751 764 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 KRT85P78386 507 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 GHRHRQ02643 423 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 NOGQ13253 232 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 CFAP45Q9UL16 551 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 PEX10O60683 326 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 FOSP01100 380 aaPredicted RBP30.25■■■□□ 2.43
TMEM248-205ENST00000433271 TM4SF4P48230 202 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 GRM1Q13255 1194 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 AP3B2Q13367 1082 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms