RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MYO9BQ13459 2157 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 UMODL1Q5DID0 1318 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 TSPY2A6NKD2 308 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 ERC2O15083 957 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 SLC3A2P08195 630 aaKnown RBP19.63■□□□□ 0.73
VARS-216ENST00000428445 TTBK2Q6IQ55 1244 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 RCSD1Q6JBY9 416 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 ZNF365Q70YC5 407 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 FAM160B2Q86V87 743 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 GMCL1Q96IK5 515 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 ZNF576Q9H609 170 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 PRR12Q9ULL5 1215 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 SYNPO2Q9UMS6 1093 aa19.63■□□□□ 0.73
VARS-216ENST00000428445 GNEQ9Y223 722 aaKnown RBP19.63■□□□□ 0.73
VARS-216ENST00000428445 GRIN2DO15399 1336 aa19.62■□□□□ 0.73
VARS-216ENST00000428445 DYNC1LI2O43237 492 aaPredicted RBP19.62■□□□□ 0.73
VARS-216ENST00000428445 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
VARS-216ENST00000428445 SMPD1P17405 629 aa19.62■□□□□ 0.73
VARS-216ENST00000428445 MX1P20591 662 aa19.62■□□□□ 0.73
VARS-216ENST00000428445 SLC16A2P36021 539 aa19.62■□□□□ 0.73
VARS-216ENST00000428445 LRRFIP1Q32MZ4 808 aaKnown RBP19.62■□□□□ 0.73
VARS-216ENST00000428445 FBXO16Q8IX29 292 aaPredicted RBP19.62■□□□□ 0.73
VARS-216ENST00000428445 TIFAQ96CG3 184 aa19.62■□□□□ 0.73
VARS-216ENST00000428445 PRDM6Q9NQX0 595 aa19.62■□□□□ 0.73
VARS-216ENST00000428445 LCTP09848 1927 aa19.62■□□□□ 0.73
VARS-216ENST00000428445 MROH7Q68CQ1 1323 aa19.61■□□□□ 0.73
VARS-216ENST00000428445 CD4P01730 458 aa19.61■□□□□ 0.73
VARS-216ENST00000428445 PSMC6P62333 389 aa19.61■□□□□ 0.73
VARS-216ENST00000428445 TAPT1Q6NXT6 567 aa19.61■□□□□ 0.73
VARS-216ENST00000428445 TLK2Q86UE8 772 aa19.61■□□□□ 0.73
VARS-216ENST00000428445 PPM1EQ8WY54 764 aa19.61■□□□□ 0.73
VARS-216ENST00000428445 PBX4Q9BYU1 374 aa19.61■□□□□ 0.73
VARS-216ENST00000428445 SALL3Q9BXA9 1300 aa19.6■□□□□ 0.73
VARS-216ENST00000428445 FDX1P10109 184 aa19.6■□□□□ 0.73
VARS-216ENST00000428445 PPIGQ13427 754 aaKnown RBP eCLIP19.6■□□□□ 0.738e-7■■■■□ 21.1
VARS-216ENST00000428445 NSMFQ6X4W1 530 aa19.6■□□□□ 0.73
VARS-216ENST00000428445 TMEM199Q8N511 208 aa19.6■□□□□ 0.73
VARS-216ENST00000428445 TRPV6Q9H1D0 765 aa19.6■□□□□ 0.73
VARS-216ENST00000428445 CYP39A1Q9NYL5 469 aa19.6■□□□□ 0.73
VARS-216ENST00000428445 CXXC1Q9P0U4 656 aaPredicted RBP19.6■□□□□ 0.73
VARS-216ENST00000428445 FRMPD2Q68DX3 1309 aaPredicted RBP19.59■□□□□ 0.73
VARS-216ENST00000428445 ASB14A6NK59 587 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 TLR3O15455 904 aaKnown RBP19.59■□□□□ 0.73
VARS-216ENST00000428445 CCL23P55773 120 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 NKX3-2P78367 333 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 ITGA7Q13683 1181 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 FSCN1Q16658 493 aaKnown RBP19.59■□□□□ 0.73
VARS-216ENST00000428445 CCDC96Q2M329 555 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 RRP12Q5JTH9 1297 aaKnown RBP19.59■□□□□ 0.73
VARS-216ENST00000428445 ANKRD45Q5TZF3 282 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 RASIP1Q5U651 963 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 CCPG1Q9ULG6 757 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 LRRC37A2A6NM11 1700 aa19.59■□□□□ 0.73
VARS-216ENST00000428445 TMEM265A0A087WTH1 108 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 PLA2G6O60733 806 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 BAATQ14032 418 aaPredicted RBP19.58■□□□□ 0.72
VARS-216ENST00000428445 TKFCQ3LXA3 575 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 SLC43A3Q8NBI5 491 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 PPP1R13LQ8WUF5 828 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 FAM227BQ96M60 508 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 AP5M1Q9H0R1 490 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 PRDM12Q9H4Q4 367 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 GPCPD1Q9NPB8 672 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 TOMM22Q9NS69 142 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 GBF1Q92538 1859 aa19.58■□□□□ 0.72
VARS-216ENST00000428445 B4GALT4O60513 344 aa19.57■□□□□ 0.72
VARS-216ENST00000428445 KIAA1211Q6ZU35 1233 aa19.57■□□□□ 0.72
VARS-216ENST00000428445 NFIBO00712 420 aa19.56■□□□□ 0.72
VARS-216ENST00000428445 IQSEC1Q6DN90 963 aa19.56■□□□□ 0.72
VARS-216ENST00000428445 OTOP2Q7RTS6 562 aa19.56■□□□□ 0.72
VARS-216ENST00000428445 TMEM47Q9BQJ4 181 aa19.56■□□□□ 0.72
VARS-216ENST00000428445 HIPK3Q9H422 1215 aa19.56■□□□□ 0.72
VARS-216ENST00000428445 IL23AQ9NPF7 189 aa19.56■□□□□ 0.72
VARS-216ENST00000428445 ANAPC4Q9UJX5 808 aa19.56■□□□□ 0.72
VARS-216ENST00000428445 CHD9Q3L8U1 2897 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 A0A0D9SFI3 127 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 FGAP02671 866 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 ICAM1P05362 532 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 NOVP48745 357 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 HAND2P61296 217 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 SCLYQ96I15 445 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 CRBNQ96SW2 442 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 WNT8AQ9H1J5 351 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 RANBP17Q9H2T7 1088 aaKnown RBP19.55■□□□□ 0.72
VARS-216ENST00000428445 NKX2-4Q9H2Z4 354 aa19.55■□□□□ 0.72
VARS-216ENST00000428445 RBAK-RBAKDNI3L0D1 243 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 ORC4O43929 436 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 FGBP02675 491 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 RABGGTBP53611 331 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 ADGRE1Q14246 886 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 CCDC85BQ15834 202 aaPredicted RBP19.54■□□□□ 0.72
VARS-216ENST00000428445 SYDE2Q5VT97 1194 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 PSRC1Q6PGN9 363 aaPredicted RBP19.54■□□□□ 0.72
VARS-216ENST00000428445 DCAF4Q8WV16 495 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 HERVK_113Q902F9 699 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 EVI5LQ96CN4 794 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 VWCEQ96DN2 955 aa19.54■□□□□ 0.72
VARS-216ENST00000428445 NOC4LQ9BVI4 516 aaKnown RBP19.54■□□□□ 0.72
VARS-216ENST00000428445 YBX2Q9Y2T7 364 aaKnown RBP19.54■□□□□ 0.72
VARS-216ENST00000428445 PTPDC1A2A3K4 754 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms