RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 TRIM9Q9C026 710 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 ADAM21Q9UKJ8 722 aa8.82□□□□□ -1
LRCH3-204ENST00000428136 TNRC6CQ9HCJ0 1690 aaKnown RBP8.81□□□□□ -1
LRCH3-204ENST00000428136 PP2D1A8MPX8 630 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 RASA1P20936 1047 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 USP14P54578 494 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 ZBED6P86452 979 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 INF2Q27J81 1249 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 MIIPQ5JXC2 388 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 CNNM4Q6P4Q7 775 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 KRT25Q7Z3Z0 450 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 FAM114A1Q8IWE2 563 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 SH3RF3Q8TEJ3 882 aaPredicted RBP8.81□□□□□ -1
LRCH3-204ENST00000428136 TUBGCP2Q9BSJ2 902 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 ZSWIM4Q9H7M6 989 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 MAPK8IP1Q9UQF2 711 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 SNED1Q8TER0 1413 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 BAZ2BQ9UIF8 2168 aaKnown RBP8.81□□□□□ -1
LRCH3-204ENST00000428136 ABCB11O95342 1321 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 ESYT2A0FGR8 921 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 ANO9A1A5B4 782 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 RPS6KA5O75582 802 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 OR52Z1P0C646 297 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 ZNF572Q7Z3I7 529 aaPredicted RBP8.81□□□□□ -1
LRCH3-204ENST00000428136 DZIP1Q86YF9 867 aaKnown RBP8.81□□□□□ -1
LRCH3-204ENST00000428136 NOA1Q8NC60 698 aaKnown RBP8.81□□□□□ -1
LRCH3-204ENST00000428136 DYNLL2Q96FJ2 89 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 SETDB2Q96T68 719 aa8.81□□□□□ -1
LRCH3-204ENST00000428136 KDM4FA0A1W2PPD8 638 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 USP17L3A6NCW0 530 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 USP17L4A6NCW7 530 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 ERICH4A6NGS2 130 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 EIF3JO75822 258 aaKnown RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 LCA5LO95447 670 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 LDHBP07195 334 aaKnown RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 PLCG1P19174 1290 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 AARSP49588 968 aaKnown RBP eCLIP8.8□□□□□ -1
LRCH3-204ENST00000428136 CASP8Q14790 479 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 ANKRD40Q6AI12 368 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 TPTE2Q6XPS3 522 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 CABP7Q86V35 215 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 MMTAG2Q9BU76 263 aaKnown RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 MAGEC2Q9UBF1 373 aaPredicted RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 BAG3O95817 575 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 TFRCP02786 760 aaKnown RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 TSPY3P0CV98 308 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 TSPY8P0CW00 308 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 MCM3P25205 808 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 TXNRD1Q16881 649 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 CENPPQ6IPU0 288 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 C16orf86Q6ZW13 317 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 CSGALNACT2Q8N6G5 542 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 NEDD1Q8NHV4 660 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 TRIM47Q96LD4 638 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 MKNK2Q9HBH9 465 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 PDE11AQ9HCR9 933 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 TRIM10Q9UDY6 481 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 SAR1BQ9Y6B6 198 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 B4DLN1 442 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 hCG_1984214I3L0E3 225 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 CYLC1P35663 651 aaPredicted RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 NBPF5PQ86XG9 351 aaPredicted RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 ZNF713Q8N859 430 aaPredicted RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 MTMR9Q96QG7 549 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 RTFDC1Q9BY42 306 aaPredicted RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 NHEJ1Q9H9Q4 299 aaPredicted RBP8.8□□□□□ -1
LRCH3-204ENST00000428136 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 GUCA1BQ9UMX6 200 aa8.8□□□□□ -1
LRCH3-204ENST00000428136 KLRF2D3W0D1 207 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 KRT86O43790 486 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 ATP1A1P05023 1023 aaKnown RBP8.79□□□□□ -1
LRCH3-204ENST00000428136 LDHCP07864 332 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 GNA11P29992 359 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 AMPD3Q01432 767 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 ITIH3Q06033 890 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 STK4Q13043 487 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 NONOQ15233 471 aaKnown RBP eCLIP8.79□□□□□ -1
LRCH3-204ENST00000428136 TSR1Q2NL82 804 aaKnown RBP8.79□□□□□ -1
LRCH3-204ENST00000428136 NCAPH2Q6IBW4 605 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 HEATR3Q7Z4Q2 680 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 AMOTL1Q8IY63 956 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 ZNF444Q8N0Y2 327 aaPredicted RBP8.79□□□□□ -1
LRCH3-204ENST00000428136 GOLGA5Q8TBA6 731 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 FAM71BQ8TC56 605 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 RUBCNQ92622 972 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 CCDC47Q96A33 483 aaKnown RBP8.79□□□□□ -1
LRCH3-204ENST00000428136 MED4Q9NPJ6 270 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 AGPAT5Q9NUQ2 364 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 FOCADQ5VW36 1801 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 PVALEFA0A1B0GWK0 134 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 RCCD1A6NED2 376 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 RHOXF2BP0C7M4 288 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 PRLRP16471 622 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 FXR2P51116 673 aaKnown RBP eCLIP8.79□□□□□ -1
LRCH3-204ENST00000428136 CKAP4Q07065 602 aaKnown RBP8.79□□□□□ -1
LRCH3-204ENST00000428136 CCDC122Q5T0U0 273 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 ARHGAP27Q6ZUM4 889 aa8.79□□□□□ -1
LRCH3-204ENST00000428136 NEK8Q86SG6 692 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms