RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 AP5M1Q9H0R1 490 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 TCP11L1Q9NUJ3 509 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 CD4P01730 458 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 FOSL2P15408 326 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 ANKRD45Q5TZF3 282 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 PSRC1Q6PGN9 363 aaPredicted RBP15.22■□□□□ 0.03
NELFE-203ENST00000426722 BTNL9Q6UXG8 535 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
NELFE-203ENST00000426722 SLC43A3Q8NBI5 491 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 MORC4Q8TE76 937 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■■■□□ 16.9
NELFE-203ENST00000426722 RANBP17Q9H2T7 1088 aaKnown RBP15.22■□□□□ 0.03
NELFE-203ENST00000426722 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 CYP39A1Q9NYL5 469 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 ADD3Q9UEY8 706 aaKnown RBP15.22■□□□□ 0.03
NELFE-203ENST00000426722 CCPG1Q9ULG6 757 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 LRRC37A2A6NM11 1700 aa15.22■□□□□ 0.03
NELFE-203ENST00000426722 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.21■□□□□ 0.03
NELFE-203ENST00000426722 ICAM1P05362 532 aa15.21■□□□□ 0.03
NELFE-203ENST00000426722 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.03
NELFE-203ENST00000426722 DNAJB2P25686 324 aa15.21■□□□□ 0.03
NELFE-203ENST00000426722 IRX5P78411 483 aaPredicted RBP15.21■□□□□ 0.03
NELFE-203ENST00000426722 MCMDC2Q4G0Z9 681 aa15.21■□□□□ 0.03
NELFE-203ENST00000426722 TMEM240Q5SV17 173 aa15.21■□□□□ 0.03
NELFE-203ENST00000426722 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
NELFE-203ENST00000426722 ASTN1O14525 1302 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 ZMYM6O95789 1325 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 LCTP09848 1927 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 NMT2O60551 498 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 TOP1P11387 765 aaKnown RBP15.2■□□□□ 0.02
NELFE-203ENST00000426722 NT5C2P49902 561 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 PDE1AP54750 535 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 RRP1P56182 461 aaKnown RBP15.2■□□□□ 0.02
NELFE-203ENST00000426722 BEX3Q00994 111 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
NELFE-203ENST00000426722 FSCN1Q16658 493 aaKnown RBP15.2■□□□□ 0.02
NELFE-203ENST00000426722 CCDC96Q2M329 555 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 MUM1L1Q5H9M0 696 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 VPS53Q5VIR6 699 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 TAPT1Q6NXT6 567 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 TTC14Q96N46 770 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 MTIF3Q9H2K0 278 aaKnown RBP15.2■□□□□ 0.02
NELFE-203ENST00000426722 INCENPQ9NQS7 918 aa15.2■□□□□ 0.02
NELFE-203ENST00000426722 DYNC1LI2O43237 492 aaPredicted RBP15.19■□□□□ 0.02
NELFE-203ENST00000426722 FGAP02671 866 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 CSF2RAP15509 400 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 SMPD1P17405 629 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 ITGA7Q13683 1181 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 AAMPQ13685 434 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 SYDE2Q5VT97 1194 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 CXCL17Q6UXB2 119 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 NSMFQ6X4W1 530 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 C16orf59Q7L2K0 433 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 TIFAQ96CG3 184 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
NELFE-203ENST00000426722 PPP1R12CQ9BZL4 782 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 ZNF576Q9H609 170 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 IL23AQ9NPF7 189 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
NELFE-203ENST00000426722 GRIN2CQ14957 1233 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 DUSP28Q4G0W2 176 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 KIAA1211Q6ZU35 1233 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 HERVK_113Q902F9 699 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 SYMPKQ92797 1274 aaKnown RBP15.18■□□□□ 0.02
NELFE-203ENST00000426722 TMEM47Q9BQJ4 181 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 MAF1Q9H063 256 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
NELFE-203ENST00000426722 RBM47A0AV96 593 aaKnown RBP15.17■□□□□ 0.02
NELFE-203ENST00000426722 FGBP02675 491 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 HSPD1P10809 573 aaKnown RBP15.17■□□□□ 0.02
NELFE-203ENST00000426722 ALDH5A1P51649 535 aaPredicted RBP15.17■□□□□ 0.02
NELFE-203ENST00000426722 MFAP1P55081 439 aaKnown RBP15.17■□□□□ 0.02
NELFE-203ENST00000426722 SNAP25P60880 206 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 BAATQ14032 418 aaPredicted RBP15.17■□□□□ 0.02
NELFE-203ENST00000426722 RAB30Q15771 203 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 TTBK2Q6IQ55 1244 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 EEPD1Q7L9B9 569 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
NELFE-203ENST00000426722 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
NELFE-203ENST00000426722 CHMP4CQ96CF2 233 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 PBX4Q9BYU1 374 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 HIPK3Q9H422 1215 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 PDGFCQ9NRA1 345 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
NELFE-203ENST00000426722 B4DLN1 442 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
NELFE-203ENST00000426722 SUPT20HL2P0C7V6 817 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 CYP2C18P33260 490 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 MRPL12P52815 198 aaKnown RBP15.16■□□□□ 0.02
NELFE-203ENST00000426722 RRP12Q5JTH9 1297 aaKnown RBP15.16■□□□□ 0.02
NELFE-203ENST00000426722 AKNAD1Q5T1N1 836 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 MFSD6Q6ZSS7 791 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 DNERQ8NFT8 737 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 GAS2L1Q99501 681 aaPredicted RBP15.16■□□□□ 0.02
NELFE-203ENST00000426722 RNF41Q9H4P4 317 aaPredicted RBP15.16■□□□□ 0.02
NELFE-203ENST00000426722 MSRAQ9UJ68 235 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 GRIN2DO15399 1336 aa15.16■□□□□ 0.02
NELFE-203ENST00000426722 WDR19Q8NEZ3 1342 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms