RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
GINS3-203ENST00000426538 PHIPQ8WWQ0 1821 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 USP17L15C9J2P7 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L13C9JLJ4 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L11C9JVI0 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L18D6R9N7 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L22D6RA61 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L17D6RBQ6 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L19D6RCP7 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L20D6RJB6 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 CUTAO60888 179 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 CLK2P49760 499 aaKnown RBP17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L24Q0WX57 530 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 COG2Q14746 738 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 UBE2SQ16763 222 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 MRPS27Q92552 414 aaKnown RBP17.22■□□□□ 0.35
GINS3-203ENST00000426538 NMRK2Q9NPI5 230 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
GINS3-203ENST00000426538 SPDYE5A6NIY4 337 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 UNCXA6NJT0 531 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 CXCL11O14625 94 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 IRF6O14896 467 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 ICAM1P05362 532 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 LIG1P18858 919 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 PTGDRQ13258 359 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 LETM2Q2VYF4 491 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 CATSPERGQ6ZRH7 1159 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 TEX2Q8IWB9 1127 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 SLC10A4Q96EP9 437 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 SLC38A10Q9HBR0 1119 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 HOXC10Q9NYD6 342 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 CCPG1Q9ULG6 757 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 SRPRBQ9Y5M8 271 aaKnown RBP17.21■□□□□ 0.35
GINS3-203ENST00000426538 MORC2Q9Y6X9 1032 aaPredicted RBP17.21■□□□□ 0.35
GINS3-203ENST00000426538 ABCB11O95342 1321 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 CCNT1O60563 726 aaKnown RBP17.21■□□□□ 0.35
GINS3-203ENST00000426538 PTPREP23469 700 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 CMA1P23946 247 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 AP3B2Q13367 1082 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 AXDND1Q5T1B0 1012 aaPredicted RBP17.21■□□□□ 0.35
GINS3-203ENST00000426538 CCDC183Q5T5S1 534 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
GINS3-203ENST00000426538 SPDYE3A6NKU9 549 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 WNT7AO00755 349 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 MEIS2O14770 477 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 FOSP01100 380 aaPredicted RBP17.2■□□□□ 0.34
GINS3-203ENST00000426538 FKBP1BP68106 108 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 PPIL2Q13356 520 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 GSE1Q14687 1217 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 ZSCAN23Q3MJ62 389 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 LDLRAD1Q5T700 205 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 C2orf69Q8N8R5 385 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
GINS3-203ENST00000426538 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
GINS3-203ENST00000426538 A0A1B0GVL5 298 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 VWA5AO00534 786 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 NR1I2O75469 434 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 LETM1O95202 739 aaPredicted RBP17.19■□□□□ 0.34
GINS3-203ENST00000426538 CFBP00751 764 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 DSG3P32926 999 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 ATP2C1P98194 919 aaPredicted RBP17.19■□□□□ 0.34
GINS3-203ENST00000426538 FAM160A1Q05DH4 1040 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 FMR1Q06787 632 aaKnown RBP eCLIP17.19■□□□□ 0.34
GINS3-203ENST00000426538 GADL1Q6ZQY3 521 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 PROCA1Q8NCQ7 364 aaPredicted RBP17.19■□□□□ 0.34
GINS3-203ENST00000426538 ATG4CQ96DT6 458 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
GINS3-203ENST00000426538 OTOFQ9HC10 1997 aa17.19■□□□□ 0.34
GINS3-203ENST00000426538 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 PIK3CDO00329 1044 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 LAD1O00515 517 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 ORC2Q13416 577 aaPredicted RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 ARL6IP4Q66PJ3 421 aaKnown RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 ZNF579Q8NAF0 562 aaKnown RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 GBA2Q9HCG7 927 aaPredicted RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 ZNF536O15090 1300 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 CELF2O95319 508 aaKnown RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 ALAS1P13196 640 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 NAP1L4Q99733 375 aaKnown RBP17.18■□□□□ 0.34
GINS3-203ENST00000426538 ANO3Q9BYT9 981 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 GOLPH3LQ9H4A5 285 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 KCNH4Q9UQ05 1017 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 MRVI1Q9Y6F6 885 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 PAPPA2Q9BXP8 1791 aa17.18■□□□□ 0.34
GINS3-203ENST00000426538 OPLAHO14841 1288 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms