RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 IL1R1P14778 569 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 EN1Q05925 392 aaPredicted RBP15.01□□□□□ -0.01
USP42-203ENST00000426246 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 USP17L2Q6R6M4 530 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 TBC1D16Q8TBP0 767 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 GPCPD1Q9NPB8 672 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 DLEC1Q9Y238 1755 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 MYH2Q9UKX2 1941 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 G3V3G9 751 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 SGMS1Q86VZ5 419 aa15.01□□□□□ -0.01
USP42-203ENST00000426246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.01□□□□□ -0.01
USP42-203ENST00000426246 SLC15A2Q16348 729 aa15□□□□□ -0.01
USP42-203ENST00000426246 SOGA3Q5TF21 947 aa15□□□□□ -0.01
USP42-203ENST00000426246 PNMA1Q8ND90 353 aa15□□□□□ -0.01
USP42-203ENST00000426246 PNKPQ96T60 521 aa15□□□□□ -0.01
USP42-203ENST00000426246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15□□□□□ -0.013e-6■■■■■ 84.9
USP42-203ENST00000426246 AKR1B10O60218 316 aa15□□□□□ -0.01
USP42-203ENST00000426246 TNNI2P48788 182 aa15□□□□□ -0.01
USP42-203ENST00000426246 COPB1P53618 953 aaKnown RBP15□□□□□ -0.01
USP42-203ENST00000426246 SLC7A5Q01650 507 aa15□□□□□ -0.01
USP42-203ENST00000426246 STIM1Q13586 685 aa15□□□□□ -0.01
USP42-203ENST00000426246 PROCA1Q8NCQ7 364 aaPredicted RBP15□□□□□ -0.01
USP42-203ENST00000426246 SLX4Q8IY92 1834 aa15□□□□□ -0.01
USP42-203ENST00000426246 C6orf229H3BNL8 230 aa15□□□□□ -0.01
USP42-203ENST00000426246 RPN1P04843 607 aaKnown RBP15□□□□□ -0.01
USP42-203ENST00000426246 GYPCP04921 128 aa15□□□□□ -0.01
USP42-203ENST00000426246 SCG2P13521 617 aa15□□□□□ -0.01
USP42-203ENST00000426246 MSL1Q68DK7 614 aa15□□□□□ -0.01
USP42-203ENST00000426246 SP8Q8IXZ3 490 aa15□□□□□ -0.01
USP42-203ENST00000426246 NAPGQ99747 312 aaPredicted RBP15□□□□□ -0.01
USP42-203ENST00000426246 TRIM66O15016 1216 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 BUB1O43683 1085 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 ERLIN1O75477 346 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 ATP2B4P23634 1241 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 VSNL1P62760 191 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 CCDC181Q5TID7 509 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 CERS3Q8IU89 383 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 NELFCDQ8IXH7 590 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 STAG1Q8WVM7 1258 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 L2HGDHQ9H9P8 463 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 ANAPC4Q9UJX5 808 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 ATP6V0A2Q9Y487 856 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 FOCADQ5VW36 1801 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
USP42-203ENST00000426246 UFL1O94874 794 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 CTR9Q6PD62 1173 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 AGPAT5Q9NUQ2 364 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 EHD2Q9NZN4 543 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 TTC26A0AVF1 554 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 KRT18P05783 430 aaKnown RBP14.99□□□□□ -0.01
USP42-203ENST00000426246 SYCP1Q15431 976 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 ZSCAN26Q16670 478 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 DNAAF5Q86Y56 855 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 CNGA4Q8IV77 575 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 BPIFA3Q9BQP9 254 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 TMEM60Q9H2L4 133 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 CD209Q9NNX6 404 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 GGA1Q9UJY5 639 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 PHLPP2Q6ZVD8 1323 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 SNED1Q8TER0 1413 aa14.99□□□□□ -0.01
USP42-203ENST00000426246 MFAP3LO75121 409 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 FCER1AP12319 257 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 CACNA2D4Q7Z3S7 1137 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 TCP11L1Q9NUJ3 509 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 CALCOCO1Q9P1Z2 691 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 TBC1D8O95759 1140 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 NPR1P16066 1061 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 H2AFXP16104 143 aaPredicted RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 TMED8Q6PL24 325 aaPredicted RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 LRRC47Q8N1G4 583 aaKnown RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 GPR161Q8N6U8 529 aaKnown RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 SHISA4Q96DD7 197 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 EXOC1Q9NV70 894 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 MRFAP1Q9Y605 127 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 PARP1P09874 1014 aaKnown RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 NR1I3Q14994 352 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 TMC4Q7Z404 712 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 CCDC148Q8NFR7 591 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 NOC4LQ9BVI4 516 aaKnown RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 PDGFDQ9GZP0 370 aaPredicted RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 MKRN1Q9UHC7 482 aaKnown RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 ADAM21Q9UKJ8 722 aa14.98□□□□□ -0.01
USP42-203ENST00000426246 EPN1Q9Y6I3 576 aaPredicted RBP14.98□□□□□ -0.01
USP42-203ENST00000426246 H3BQF6 201 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 PKN1Q16512 942 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 ZNF804AQ7Z570 1209 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 C2CD5Q86YS7 1000 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 GOLGA6L9A6NEM1 432 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 PSMA7O14818 248 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 FGRP09769 529 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 ERVK-24P63145 666 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 BLIDQ8IZY5 108 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 CCDC155Q8N6L0 562 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 IFT81Q8WYA0 676 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 CCDC47Q96A33 483 aaKnown RBP14.97□□□□□ -0.01
USP42-203ENST00000426246 COA7Q96BR5 231 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms