RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 JAK2O60674 1132 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 TAL1P17542 331 aaPredicted RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 CDC27P30260 824 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 ADD1P35611 737 aaKnown RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 STAT3P40763 770 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 RCAN1P53805 252 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 LACTBP83111 547 aaPredicted RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 RTN1Q16799 776 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 NOM1Q5C9Z4 860 aaKnown RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 GPT2Q8TD30 523 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 MOV10L1Q9BXT6 1211 aaKnown RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 RANBP17Q9H2T7 1088 aaKnown RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 EFCC1Q9HA90 598 aa18■□□□□ 0.47
SHOX2-202ENST00000425436 FAM217BQ9NTX9 383 aaPredicted RBP18■□□□□ 0.47
SHOX2-202ENST00000425436 CTDNEP1O95476 244 aa17.99■□□□□ 0.47
SHOX2-202ENST00000425436 PSMC4P43686 418 aa17.99■□□□□ 0.47
SHOX2-202ENST00000425436 METAP2P50579 478 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHOX2-202ENST00000425436 WDR78Q5VTH9 848 aa17.99■□□□□ 0.47
SHOX2-202ENST00000425436 CAVIN1Q6NZI2 390 aaKnown RBP17.99■□□□□ 0.47
SHOX2-202ENST00000425436 NCOA5Q9HCD5 579 aaKnown RBP17.99■□□□□ 0.47
SHOX2-202ENST00000425436 CFAP45Q9UL16 551 aa17.99■□□□□ 0.47
SHOX2-202ENST00000425436 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
SHOX2-202ENST00000425436 ZNF536O15090 1300 aa17.99■□□□□ 0.47
SHOX2-202ENST00000425436 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
SHOX2-202ENST00000425436 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
SHOX2-202ENST00000425436 PPP2R5BQ15173 497 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 SNRNP48Q6IEG0 339 aaKnown RBP17.98■□□□□ 0.47
SHOX2-202ENST00000425436 CCAR1Q8IX12 1150 aaKnown RBP17.98■□□□□ 0.47
SHOX2-202ENST00000425436 RIOX1Q9H6W3 641 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 CNPY2Q9Y2B0 182 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 MGAMO43451 1857 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 ELP1O95163 1332 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 MYH6P13533 1939 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 FDX1P10109 184 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 ERCC3P19447 782 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 GNAQP50148 359 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 CCNA1P78396 465 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 DNM1Q05193 864 aaKnown RBP17.98■□□□□ 0.47
SHOX2-202ENST00000425436 KIF22Q14807 665 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 CDC37Q16543 378 aaPredicted RBP17.98■□□□□ 0.47
SHOX2-202ENST00000425436 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 NCAPG2Q86XI2 1143 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 ERO1AQ96HE7 468 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 PIGSQ96S52 555 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 TEX13BQ9BXU2 312 aa17.98■□□□□ 0.47
SHOX2-202ENST00000425436 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
SHOX2-202ENST00000425436 hCG_1642624A0A1W2PR95 340 aa17.97■□□□□ 0.47
SHOX2-202ENST00000425436 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
SHOX2-202ENST00000425436 RIOX2Q8IUF8 465 aa17.97■□□□□ 0.47
SHOX2-202ENST00000425436 LZTS2Q9BRK4 669 aa17.97■□□□□ 0.47
SHOX2-202ENST00000425436 HOMER2Q9NSB8 354 aa17.97■□□□□ 0.47
SHOX2-202ENST00000425436 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 ATP2A1O14983 1001 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 DTNBO60941 627 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 ALAS1P13196 640 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 OAZ1P54368 228 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 FCGRTP55899 365 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 QRICH1Q2TAL8 776 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 ZSCAN23Q3MJ62 389 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 FOXD4L6Q3SYB3 417 aaPredicted RBP17.96■□□□□ 0.47
SHOX2-202ENST00000425436 USH1GQ495M9 461 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 FOXD4L3Q6VB84 417 aaPredicted RBP17.96■□□□□ 0.47
SHOX2-202ENST00000425436 CCPG1Q9ULG6 757 aa17.96■□□□□ 0.47
SHOX2-202ENST00000425436 TNPO2O14787 897 aaKnown RBP17.95■□□□□ 0.46
SHOX2-202ENST00000425436 ICAM1P05362 532 aa17.95■□□□□ 0.46
SHOX2-202ENST00000425436 GPR142Q7Z601 462 aa17.95■□□□□ 0.46
SHOX2-202ENST00000425436 MTMR8Q96EF0 704 aa17.95■□□□□ 0.46
SHOX2-202ENST00000425436 SPZ1Q9BXG8 430 aa17.95■□□□□ 0.46
SHOX2-202ENST00000425436 ZBTB5O15062 677 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 FIBPO43427 364 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 PPP1R11O60927 126 aaPredicted RBP17.94■□□□□ 0.46
SHOX2-202ENST00000425436 SMARCA1P28370 1054 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 MAPK4P31152 587 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 FUT2Q10981 343 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 RESTQ13127 1097 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 CHAMP1Q96JM3 812 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
SHOX2-202ENST00000425436 TRERF1Q96PN7 1200 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 MROH8Q9H579 483 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 ORC3Q9UBD5 711 aaPredicted RBP17.94■□□□□ 0.46
SHOX2-202ENST00000425436 TRIM17Q9Y577 477 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
SHOX2-202ENST00000425436 NID2Q14112 1375 aa17.94■□□□□ 0.46
SHOX2-202ENST00000425436 SLC25A27O95847 323 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 MUM1L1Q5H9M0 696 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 PLEKHH3Q7Z736 793 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 FBXO11Q86XK2 927 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 SHCBP1Q8NEM2 672 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 WASF1Q92558 559 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 PHKBQ93100 1093 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 COA7Q96BR5 231 aa17.93■□□□□ 0.46
SHOX2-202ENST00000425436 RRP36Q96EU6 259 aaKnown RBP17.93■□□□□ 0.46
SHOX2-202ENST00000425436 C8orf76Q96K31 380 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms