RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 UBXN4Q92575 508 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 VEZTQ9HBM0 779 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 NAV1Q8NEY1 1877 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 MYH1P12882 1939 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 BRCA1P38398 1863 aaKnown RBP12.04□□□□□ -0.48
CUX1-205ENST00000425244 VIL1P09327 827 aaKnown RBP12.04□□□□□ -0.48
CUX1-205ENST00000425244 CDK8P49336 464 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 FILIP1LQ4L180 1135 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 CIAPIN1Q6FI81 312 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 PLIN2Q99541 437 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 SERPINA10Q9UK55 444 aa12.04□□□□□ -0.48
CUX1-205ENST00000425244 CCDC194A0A1B0GVG4 234 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 CALML3P27482 149 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 EIF6P56537 245 aaKnown RBP12.03□□□□□ -0.48
CUX1-205ENST00000425244 DLGAP5Q15398 846 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 LZTFL1Q9NQ48 299 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 TXLNAP40222 546 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 STAT6P42226 847 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 TRAPPC10P48553 1259 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 E2F4Q16254 413 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 APTXQ7Z2E3 356 aaKnown RBP12.03□□□□□ -0.48
CUX1-205ENST00000425244 SECISBP2LQ93073 1101 aaKnown RBP12.03□□□□□ -0.48
CUX1-205ENST00000425244 MTRQ99707 1265 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 HDAC9Q9UKV0 1011 aa12.03□□□□□ -0.48
CUX1-205ENST00000425244 PP2D1A8MPX8 630 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 CDKAL1Q5VV42 579 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 PDXDC2PQ6P474 469 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 RASGRP2Q7LDG7 609 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 SYT17Q9BSW7 474 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 VPS16Q9H269 839 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 CPVLQ9H3G5 476 aa12.02□□□□□ -0.48
CUX1-205ENST00000425244 MRPL44Q9H9J2 332 aaKnown RBP12.02□□□□□ -0.48
CUX1-205ENST00000425244 ADD3Q9UEY8 706 aaKnown RBP12.02□□□□□ -0.48
CUX1-205ENST00000425244 MORC2Q9Y6X9 1032 aaPredicted RBP12.02□□□□□ -0.48
CUX1-205ENST00000425244 LAMB1P07942 1786 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 GOLGA6L9A6NEM1 432 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
CUX1-205ENST00000425244 MPHOSPH10O00566 681 aaKnown RBP12.02□□□□□ -0.49
CUX1-205ENST00000425244 N4BP3O15049 544 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
CUX1-205ENST00000425244 CASP14P31944 242 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
CUX1-205ENST00000425244 INF2Q27J81 1249 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 CTAGE1Q96RT6 745 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
CUX1-205ENST00000425244 TAB2Q9NYJ8 693 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 SERPINB13Q9UIV8 391 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 GDAQ9Y2T3 454 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.49
CUX1-205ENST00000425244 EGFRP00533 1210 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 CCDC175P0C221 793 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 RASA1P20936 1047 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 NBPF9Q3BBW0 867 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 NELFBQ8WX92 580 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 ZNF446Q9NWS9 450 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 PES1O00541 588 aaKnown RBP12.01□□□□□ -0.49
CUX1-205ENST00000425244 RPN1P04843 607 aaKnown RBP12.01□□□□□ -0.49
CUX1-205ENST00000425244 HLA-DOAP06340 250 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 ATP2B2Q01814 1243 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 PAK1Q13153 545 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 KRT31Q15323 416 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 WWC2Q6AWC2 1192 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 RAD9BQ6WBX8 426 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 KRT222Q8N1A0 295 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 PANX2Q96RD6 677 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 GTPBP4Q9BZE4 634 aaKnown RBP12.01□□□□□ -0.49
CUX1-205ENST00000425244 MYO3BQ8WXR4 1341 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 A0A0U1RQJ8 604 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 RAD21O60216 631 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 CLCN6P51797 869 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 GRM4Q14833 912 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 CT47A1Q5JQC4 288 aaPredicted RBP12.01□□□□□ -0.49
CUX1-205ENST00000425244 DTHD1Q6ZMT9 781 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 CCDC12Q8WUD4 166 aaPredicted RBP12.01□□□□□ -0.49
CUX1-205ENST00000425244 ATRIPQ8WXE1 791 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 ZNF287Q9HBT7 754 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 MAD2L2Q9UI95 211 aa12.01□□□□□ -0.49
CUX1-205ENST00000425244 MFAP3LO75121 409 aa12□□□□□ -0.49
CUX1-205ENST00000425244 TADA3O75528 432 aa12□□□□□ -0.49
CUX1-205ENST00000425244 TPM1P09493 284 aa12□□□□□ -0.49
CUX1-205ENST00000425244 LONP1P36776 959 aaKnown RBP12□□□□□ -0.49
CUX1-205ENST00000425244 HDLBPQ00341 1268 aaKnown RBP12□□□□□ -0.49
CUX1-205ENST00000425244 SLC35G1Q2M3R5 365 aa12□□□□□ -0.49
CUX1-205ENST00000425244 TEX35Q5T0J7 233 aa12□□□□□ -0.49
CUX1-205ENST00000425244 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CUX1-205ENST00000425244 ANKRD20A12PQ8NF67 263 aa12□□□□□ -0.49
CUX1-205ENST00000425244 GMLQ99445 158 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms