RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 RASSF8Q8NHQ8 419 aa23.72■■□□□ 1.39
USP48-205ENST00000421625 NMT2O60551 498 aa23.72■■□□□ 1.39
USP48-205ENST00000421625 TRAPPC10P48553 1259 aa23.72■■□□□ 1.39
USP48-205ENST00000421625 GPIHBP1Q8IV16 184 aa23.72■■□□□ 1.39
USP48-205ENST00000421625 CSGALNACT2Q8N6G5 542 aa23.72■■□□□ 1.39
USP48-205ENST00000421625 NUTM2BA6NNL0 878 aaPredicted RBP23.71■■□□□ 1.39
USP48-205ENST00000421625 NUTM2EB1AL46 878 aaPredicted RBP23.71■■□□□ 1.39
USP48-205ENST00000421625 MOCS3O95396 460 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 SCG2P13521 617 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 EVX2Q03828 476 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 NFRKBQ6P4R8 1299 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 GBP6Q6ZN66 633 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 LRP5O75197 1615 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 STARD3NLO95772 234 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 KCNV1Q6PIU1 500 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 DUOX1Q9NRD9 1551 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 ABCF2Q9UG63 623 aa23.71■■□□□ 1.39
USP48-205ENST00000421625 FAM205AQ6ZU69 1335 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 MAGEB6P1A0A0J9YX57 407 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 HNRNPH1P31943 449 aaKnown RBP23.7■■□□□ 1.39
USP48-205ENST00000421625 PDCLQ13371 301 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 IQCA1Q86XH1 822 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 RASGRP4Q8TDF6 673 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 LRRC15Q8TF66 581 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 NCAPGQ9BPX3 1015 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 POLD4Q9HCU8 107 aa23.7■■□□□ 1.39
USP48-205ENST00000421625 NHSL1Q5SYE7 1610 aa23.7■■□□□ 1.38
USP48-205ENST00000421625 BAZ2AQ9UIF9 1905 aaKnown RBP23.7■■□□□ 1.38
USP48-205ENST00000421625 LOC102724159A0A0B4J2E5 919 aa23.7■■□□□ 1.38
USP48-205ENST00000421625 PWP2Q15269 919 aaKnown RBP23.7■■□□□ 1.38
USP48-205ENST00000421625 GIMAP8Q8ND71 665 aaPredicted RBP23.7■■□□□ 1.38
USP48-205ENST00000421625 CCDC42Q96M95 316 aa23.7■■□□□ 1.38
USP48-205ENST00000421625 NUP58Q9BVL2 599 aa23.7■■□□□ 1.38
USP48-205ENST00000421625 INPP5BP32019 993 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 KCNB1Q14721 858 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 ARL6IP4Q66PJ3 421 aaKnown RBP23.69■■□□□ 1.38
USP48-205ENST00000421625 SH2D3CQ8N5H7 860 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 TRIM58Q8NG06 486 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 CNOT6LQ96LI5 555 aaKnown RBP23.69■■□□□ 1.38
USP48-205ENST00000421625 OPA1O60313 960 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 CALM1P0DP23 149 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 CALM2P0DP24 149 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 CALM3P0DP25 149 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 DYNLL1P63167 89 aaKnown RBP23.69■■□□□ 1.38
USP48-205ENST00000421625 SPA17Q15506 151 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 HAUS3Q68CZ6 603 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 OSBPL9Q96SU4 736 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 MYH10P35580 1976 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 A0A0G2JS52 829 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 TACC1O75410 805 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 RHOBTB3O94955 611 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 TYW1BQ6NUM6 668 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 PIGBQ92521 554 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 TSGA10Q9BZW7 698 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 SH2D4AQ9H788 454 aa23.69■■□□□ 1.38
USP48-205ENST00000421625 TOGARAM1Q9Y4F4 1720 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 DDAH1O94760 285 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 EPHB4P54760 987 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 MIIPQ5JXC2 388 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 ZNF572Q7Z3I7 529 aaPredicted RBP23.68■■□□□ 1.38
USP48-205ENST00000421625 RETREG2Q8NC44 543 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 IFIH1Q9BYX4 1025 aaKnown RBP23.68■■□□□ 1.38
USP48-205ENST00000421625 NCK2O43639 380 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 MTIF2P46199 727 aaKnown RBP23.68■■□□□ 1.38
USP48-205ENST00000421625 KCTD16Q68DU8 428 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 ANKRD40Q6AI12 368 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 TMEM60Q9H2L4 133 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 PCDHA13Q9Y5I0 950 aa23.68■■□□□ 1.38
USP48-205ENST00000421625 ATP1A2P50993 1020 aa23.67■■□□□ 1.38
USP48-205ENST00000421625 SWT1Q5T5J6 900 aaKnown RBP23.67■■□□□ 1.38
USP48-205ENST00000421625 RUFY1Q96T51 708 aa23.67■■□□□ 1.38
USP48-205ENST00000421625 NOC4LQ9BVI4 516 aaKnown RBP23.67■■□□□ 1.38
USP48-205ENST00000421625 STIM2Q9P246 746 aa23.67■■□□□ 1.38
USP48-205ENST00000421625 ARHGAP20Q9P2F6 1191 aa23.67■■□□□ 1.38
USP48-205ENST00000421625 SHANK3Q9BYB0 1731 aa23.67■■□□□ 1.38
USP48-205ENST00000421625 PFKFB3Q16875 520 aaPredicted RBP23.67■■□□□ 1.38
USP48-205ENST00000421625 GPATCH11Q8N954 259 aa23.67■■□□□ 1.38
USP48-205ENST00000421625 MYCBPQ99417 103 aaPredicted RBP23.67■■□□□ 1.38
USP48-205ENST00000421625 ZBTB1Q9Y2K1 713 aa23.67■■□□□ 1.38
USP48-205ENST00000421625 HSF2BPO75031 334 aa23.66■■□□□ 1.38
USP48-205ENST00000421625 EPB41P11171 864 aaKnown RBP23.66■■□□□ 1.38
USP48-205ENST00000421625 SKOR1P84550 965 aa23.66■■□□□ 1.38
USP48-205ENST00000421625 GPKOWQ92917 476 aaPredicted RBP eCLIP23.66■■□□□ 1.382e-6■□□□□ 8.9
USP48-205ENST00000421625 ZIM3Q96PE6 472 aa23.66■■□□□ 1.38
USP48-205ENST00000421625 CEP89Q96ST8 783 aa23.66■■□□□ 1.38
USP48-205ENST00000421625 RIOK1Q9BRS2 568 aaKnown RBP23.66■■□□□ 1.38
USP48-205ENST00000421625 NDUFAB1O14561 156 aa23.66■■□□□ 1.38
USP48-205ENST00000421625 USO1O60763 962 aaKnown RBP23.66■■□□□ 1.38
USP48-205ENST00000421625 ITIH3Q06033 890 aa23.66■■□□□ 1.38
USP48-205ENST00000421625 NOC3LQ8WTT2 800 aaKnown RBP23.66■■□□□ 1.38
USP48-205ENST00000421625 ANKRD36CQ5JPF3 1778 aa23.66■■□□□ 1.38
USP48-205ENST00000421625 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.65■■□□□ 1.38
USP48-205ENST00000421625 EPHB6O15197 1021 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 KRT14P02533 472 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 FAM47AQ5JRC9 791 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 DTHD1Q6ZMT9 781 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 POTEDQ86YR6 584 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 C2CD5Q86YS7 1000 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 P2RX5Q93086 422 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 KBTBD4Q9NVX7 518 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms