RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SAMD1Q6SPF0 538 aaPredicted RBP24.71■■□□□ 1.55
ABCF3-202ENST00000421340 OXER1Q8TDS5 423 aa24.71■■□□□ 1.55
ABCF3-202ENST00000421340 CUL5Q93034 780 aa24.71■■□□□ 1.55
ABCF3-202ENST00000421340 CCPG1Q9ULG6 757 aa24.71■■□□□ 1.55
ABCF3-202ENST00000421340 BAZ2BQ9UIF8 2168 aaKnown RBP24.71■■□□□ 1.55
ABCF3-202ENST00000421340 BTBD19C9JJ37 291 aa24.7■■□□□ 1.54
ABCF3-202ENST00000421340 APLP1P51693 650 aa24.7■■□□□ 1.54
ABCF3-202ENST00000421340 HERVK_113P62684 666 aa24.7■■□□□ 1.54
ABCF3-202ENST00000421340 AGBL1Q96MI9 1066 aa24.7■■□□□ 1.54
ABCF3-202ENST00000421340 RAVER2Q9HCJ3 691 aaKnown RBP24.7■■□□□ 1.54
ABCF3-202ENST00000421340 MYH6P13533 1939 aa24.7■■□□□ 1.54
ABCF3-202ENST00000421340 PIK3CDO00329 1044 aa24.69■■□□□ 1.54
ABCF3-202ENST00000421340 PDHXO00330 501 aa24.69■■□□□ 1.54
ABCF3-202ENST00000421340 MKRN3Q13064 507 aaKnown RBP24.69■■□□□ 1.54
ABCF3-202ENST00000421340 USH1GQ495M9 461 aa24.69■■□□□ 1.54
ABCF3-202ENST00000421340 TEX13BQ9BXU2 312 aa24.69■■□□□ 1.54
ABCF3-202ENST00000421340 MAP3K20Q9NYL2 800 aaKnown RBP24.69■■□□□ 1.54
ABCF3-202ENST00000421340 ZNF214Q9UL59 606 aaPredicted RBP24.69■■□□□ 1.54
ABCF3-202ENST00000421340 PCDHA6Q9UN73 950 aa24.69■■□□□ 1.54
ABCF3-202ENST00000421340 PCDHA8Q9Y5H6 950 aa24.69■■□□□ 1.54
ABCF3-202ENST00000421340 CLK2P49760 499 aaKnown RBP24.68■■□□□ 1.54
ABCF3-202ENST00000421340 GHRHRQ02643 423 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 NR5A1Q13285 461 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 TMEM132BQ14DG7 1078 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 CPXCR1Q8N123 301 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 REXO1Q8N1G1 1221 aaKnown RBP24.68■■□□□ 1.54
ABCF3-202ENST00000421340 ZNF396Q96N95 335 aaPredicted RBP24.68■■□□□ 1.54
ABCF3-202ENST00000421340 GBP4Q96PP9 640 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 PTPN18Q99952 460 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 RABGAP1Q9Y3P9 1069 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 RLFQ13129 1914 aa24.68■■□□□ 1.54
ABCF3-202ENST00000421340 RASSF10A6NK89 507 aa24.67■■□□□ 1.54
ABCF3-202ENST00000421340 STAT3P40763 770 aa24.67■■□□□ 1.54
ABCF3-202ENST00000421340 MYSM1Q5VVJ2 828 aa24.67■■□□□ 1.54
ABCF3-202ENST00000421340 KRT25Q7Z3Z0 450 aa24.67■■□□□ 1.54
ABCF3-202ENST00000421340 MCF2L2Q86YR7 1114 aa24.67■■□□□ 1.54
ABCF3-202ENST00000421340 OPLAHO14841 1288 aa24.66■■□□□ 1.54
ABCF3-202ENST00000421340 BAG4O95429 457 aaKnown RBP24.66■■□□□ 1.54
ABCF3-202ENST00000421340 TRAPPC10P48553 1259 aa24.66■■□□□ 1.54
ABCF3-202ENST00000421340 SREBF2Q12772 1141 aa24.66■■□□□ 1.54
ABCF3-202ENST00000421340 RILPL1Q5EBL4 403 aa24.66■■□□□ 1.54
ABCF3-202ENST00000421340 POTEEQ6S8J3 1075 aa24.66■■□□□ 1.54
ABCF3-202ENST00000421340 CFAP45Q9UL16 551 aa24.66■■□□□ 1.54
ABCF3-202ENST00000421340 MEIS2O14770 477 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 FOSP01100 380 aaPredicted RBP24.65■■□□□ 1.54
ABCF3-202ENST00000421340 COPB2P35606 906 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 GCLCP48506 637 aaPredicted RBP24.65■■□□□ 1.54
ABCF3-202ENST00000421340 AP3B2Q13367 1082 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 DEFB115Q30KQ5 88 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 SNRNP48Q6IEG0 339 aaKnown RBP24.65■■□□□ 1.54
ABCF3-202ENST00000421340 RIOX2Q8IUF8 465 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 REM2Q8IYK8 340 aaPredicted RBP24.65■■□□□ 1.54
ABCF3-202ENST00000421340 FAM43AQ8N2R8 423 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 CLEC4DQ8WXI8 215 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 RBPJLQ9UBG7 517 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 PARP14Q460N5 1801 aa24.65■■□□□ 1.54
ABCF3-202ENST00000421340 CCDC194A0A1B0GVG4 234 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 ADAMTS3O15072 1205 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 ALAS1P13196 640 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 TM4SF4P48230 202 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 KRT85P78386 507 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 DNM1Q05193 864 aaKnown RBP24.64■■□□□ 1.54
ABCF3-202ENST00000421340 CHST13Q8NET6 341 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 TRERF1Q96PN7 1200 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 PARK7Q99497 189 aaKnown RBP24.64■■□□□ 1.54
ABCF3-202ENST00000421340 BTBD7Q9P203 1132 aa24.64■■□□□ 1.54
ABCF3-202ENST00000421340 BIN2Q9UBW5 565 aaPredicted RBP24.64■■□□□ 1.54
ABCF3-202ENST00000421340 NOL7Q9UMY1 257 aaKnown RBP24.64■■□□□ 1.54
ABCF3-202ENST00000421340 GCOM1H8Y6P7 765 aaPredicted RBP24.63■■□□□ 1.53
ABCF3-202ENST00000421340 CNMDO75829 334 aa24.63■■□□□ 1.53
ABCF3-202ENST00000421340 SLC25A27O95847 323 aa24.63■■□□□ 1.53
ABCF3-202ENST00000421340 POLR2MP0CAP2 368 aa24.63■■□□□ 1.53
ABCF3-202ENST00000421340 FAM173BQ6P4H8 233 aa24.63■■□□□ 1.53
ABCF3-202ENST00000421340 SPATC1LQ9H0A9 340 aa24.63■■□□□ 1.53
ABCF3-202ENST00000421340 FBXO40Q9UH90 709 aa24.63■■□□□ 1.53
ABCF3-202ENST00000421340 HSD17B4P51659 736 aa24.62■■□□□ 1.53
ABCF3-202ENST00000421340 NOGQ13253 232 aa24.62■■□□□ 1.53
ABCF3-202ENST00000421340 NONOQ15233 471 aaKnown RBP eCLIP24.62■■□□□ 1.53
ABCF3-202ENST00000421340 EARS2Q5JPH6 523 aaKnown RBP24.62■■□□□ 1.53
ABCF3-202ENST00000421340 PIK3AP1Q6ZUJ8 805 aa24.62■■□□□ 1.53
ABCF3-202ENST00000421340 SCAND2PQ9GZW5 306 aaPredicted RBP24.62■■□□□ 1.53
ABCF3-202ENST00000421340 RNF146Q9NTX7 359 aa24.62■■□□□ 1.53
ABCF3-202ENST00000421340 RIPK3Q9Y572 518 aa24.62■■□□□ 1.53
ABCF3-202ENST00000421340 CYP2C8P10632 490 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 JAKMIP3Q5VZ66 844 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 USP17L6PQ6QN14 398 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.61■■□□□ 1.53
ABCF3-202ENST00000421340 IFNL1Q8IU54 200 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 RASGRP4Q8TDF6 673 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 SMCR8Q8TEV9 937 aaPredicted RBP24.61■■□□□ 1.53
ABCF3-202ENST00000421340 POLR3EQ9NVU0 708 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 RTEL1Q9NZ71 1219 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 MORF4L1Q9UBU8 362 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 A0A0G2JMZ2 1700 aa24.61■■□□□ 1.53
ABCF3-202ENST00000421340 TOB1P50616 345 aaPredicted RBP24.6■■□□□ 1.53
ABCF3-202ENST00000421340 PLS1Q14651 629 aa24.6■■□□□ 1.53
ABCF3-202ENST00000421340 UBE2SQ16763 222 aa24.6■■□□□ 1.53
ABCF3-202ENST00000421340 MUM1L1Q5H9M0 696 aa24.6■■□□□ 1.53
ABCF3-202ENST00000421340 SHCBP1Q8NEM2 672 aa24.6■■□□□ 1.53
ABCF3-202ENST00000421340 ACAD9Q9H845 621 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms