RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 DCPSQ96C86 337 aaKnown RBP23.84■■□□□ 1.41
GPC1-202ENST00000420138 HOOK2Q96ED9 719 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 PDLIM2Q96JY6 352 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 A0A087WWV3 80 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 POLR2DO15514 142 aaKnown RBP23.84■■□□□ 1.41
GPC1-202ENST00000420138 LETM2Q2VYF4 491 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 FBXO11Q86XK2 927 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 ELOA2Q8IYF1 753 aaPredicted RBP23.84■■□□□ 1.41
GPC1-202ENST00000420138 KIAA1683Q9H0B3 1180 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 RRAGDQ9NQL2 400 aaPredicted RBP23.84■■□□□ 1.41
GPC1-202ENST00000420138 FZD1Q9UP38 647 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 TAL1P17542 331 aaPredicted RBP23.83■■□□□ 1.41
GPC1-202ENST00000420138 MDM2Q00987 491 aaPredicted RBP23.83■■□□□ 1.41
GPC1-202ENST00000420138 DOCK1Q14185 1865 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 IQCA1LA6NCM1 817 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 MEIS2O14770 477 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 OPLAHO14841 1288 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 ACTN4O43707 911 aaKnown RBP23.82■■□□□ 1.4
GPC1-202ENST00000420138 CCNT1O60563 726 aaKnown RBP23.82■■□□□ 1.4
GPC1-202ENST00000420138 FAM200AQ8TCP9 573 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 RANBP17Q9H2T7 1088 aaKnown RBP23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L15C9J2P7 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L13C9JLJ4 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L11C9JVI0 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L18D6R9N7 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L22D6RA61 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L17D6RBQ6 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L19D6RCP7 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L20D6RJB6 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 LAD1O00515 517 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L24Q0WX57 530 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 USP17L6PQ6QN14 398 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 SULF1Q8IWU6 871 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 CNNM3Q8NE01 707 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 P2RX7Q99572 595 aaKnown RBP23.82■■□□□ 1.4
GPC1-202ENST00000420138 DNAJC25Q9H1X3 360 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 FBXO28Q9NVF7 368 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 SERTAD1Q9UHV2 236 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 TUBE1Q9UJT0 475 aa23.82■■□□□ 1.4
GPC1-202ENST00000420138 PRPHP41219 470 aa23.81■■□□□ 1.4
GPC1-202ENST00000420138 ORC2Q13416 577 aaPredicted RBP23.81■■□□□ 1.4
GPC1-202ENST00000420138 SCYL3Q8IZE3 742 aa23.81■■□□□ 1.4
GPC1-202ENST00000420138 PDILTQ8N807 584 aa23.81■■□□□ 1.4
GPC1-202ENST00000420138 CHURC1Q8WUH1 139 aa23.81■■□□□ 1.4
GPC1-202ENST00000420138 ZKSCAN4Q969J2 545 aaPredicted RBP23.81■■□□□ 1.4
GPC1-202ENST00000420138 GLT8D2Q9H1C3 349 aa23.81■■□□□ 1.4
GPC1-202ENST00000420138 FOXN1O15353 648 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 LONP1P36776 959 aaKnown RBP23.8■■□□□ 1.4
GPC1-202ENST00000420138 DGKZQ13574 1117 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 STX1AQ16623 288 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 USH1GQ495M9 461 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 C11orf57Q6ZUT1 292 aaPredicted RBP23.8■■□□□ 1.4
GPC1-202ENST00000420138 FAM160B2Q86V87 743 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 KLRG1Q96E93 195 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 WRNIP1Q96S55 665 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 FEZ1Q99689 392 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 CBX8Q9HC52 389 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 FEM1BQ9UK73 627 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 PNOCQ13519 176 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 KIFC2Q96AC6 838 aa23.8■■□□□ 1.4
GPC1-202ENST00000420138 TAF1DQ9H5J8 278 aaPredicted RBP23.8■■□□□ 1.4
GPC1-202ENST00000420138 DCAF8L1A6NGE4 600 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 ESPNB1AK53 854 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 NEMFO60524 1076 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 SUPT20HL1Q3ZLR7 823 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 DLK2Q6UY11 383 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 DTHD1Q6ZMT9 781 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 ZC3H15Q8WU90 426 aaKnown RBP23.79■■□□□ 1.4
GPC1-202ENST00000420138 LPAR1Q92633 364 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 WDR18Q9BV38 432 aa23.79■■□□□ 1.4
GPC1-202ENST00000420138 TDP2O95551 362 aa23.78■■□□□ 1.4
GPC1-202ENST00000420138 OR52Z1P0C646 297 aa23.78■■□□□ 1.4
GPC1-202ENST00000420138 PTPRAP18433 802 aa23.78■■□□□ 1.4
GPC1-202ENST00000420138 E2F4Q16254 413 aa23.78■■□□□ 1.4
GPC1-202ENST00000420138 HS1BP3Q53T59 392 aa23.78■■□□□ 1.4
GPC1-202ENST00000420138 EAPPQ56P03 285 aaPredicted RBP23.78■■□□□ 1.4
GPC1-202ENST00000420138 MTMR9Q96QG7 549 aa23.78■■□□□ 1.4
GPC1-202ENST00000420138 EMILIN3Q9NT22 766 aa23.78■■□□□ 1.4
GPC1-202ENST00000420138 ADM5C9JUS6 153 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 WDR46O15213 610 aaKnown RBP23.77■■□□□ 1.4
GPC1-202ENST00000420138 SLC37A4O43826 429 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 PPP4R3AQ6IN85 833 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 KRT26Q7Z3Y9 468 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 LUZP1Q86V48 1076 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 POTEDQ86YR6 584 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 CRYGNQ8WXF5 182 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 ANO10Q9NW15 660 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 POTECB2RU33 542 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 CAVIN2O95810 425 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 ZNF165P49910 485 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 MTMR2Q13614 643 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 SH3RF1Q7Z6J0 888 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 PNMA8AQ86V59 439 aaPredicted RBP23.77■■□□□ 1.4
GPC1-202ENST00000420138 DHX58Q96C10 678 aa23.77■■□□□ 1.4
GPC1-202ENST00000420138 SLFN14P0C7P3 912 aa23.76■■□□□ 1.39
GPC1-202ENST00000420138 PRR29P0C7W0 189 aa23.76■■□□□ 1.39
GPC1-202ENST00000420138 CDC25AP30304 524 aa23.76■■□□□ 1.39
GPC1-202ENST00000420138 SPP2Q13103 211 aa23.76■■□□□ 1.39
GPC1-202ENST00000420138 IQCB1Q15051 598 aa23.76■■□□□ 1.39
GPC1-202ENST00000420138 ANO3Q9BYT9 981 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms