RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 MCM4P33991 863 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 IGHMBP2P38935 993 aaKnown RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 AFF1P51825 1210 aaKnown RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 NMIQ13287 307 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 CUL4AQ13619 759 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 PUM3Q15397 648 aaKnown RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 ATP2B3Q16720 1220 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 SPRED3Q2MJR0 410 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 TSNAXIP1Q2TAA8 658 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 VPS53Q5VIR6 699 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 CLEC17AQ6ZS10 378 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 JARID2Q92833 1246 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 CDC5LQ99459 802 aaKnown RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 MPHOSPH8Q99549 860 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 DBNDD2Q9BQY9 259 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 MUC3BQ9H195 1237 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 ALDH8A1Q9H2A2 487 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-205ENST00000419964 RRAGCQ9HB90 399 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 MED23Q9ULK4 1368 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 LAMB2P55268 1798 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 BCORQ6W2J9 1755 aa8.58□□□□□ -1.04
EPHA4-205ENST00000419964 ATRNO75882 1429 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 IGSF3O75054 1194 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 FRAT2O75474 233 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-205ENST00000419964 RPS6KA4O75676 772 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 PDE8BO95263 885 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 ITPK1Q13572 414 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 NECTIN1Q15223 517 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 GRIK5Q16478 980 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 LRRC24Q50LG9 513 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 IL22RA1Q8N6P7 574 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 LPIN2Q92539 896 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 DSCC1Q9BVC3 393 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 CTNNA3Q9UI47 895 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 PPM1HQ9ULR3 514 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 NIP7Q9Y221 180 aaKnown RBP eCLIP8.57□□□□□ -1.04
EPHA4-205ENST00000419964 RIPOR2Q9Y4F9 1068 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 SNX14Q9Y5W7 946 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 LRP5O75197 1615 aa8.57□□□□□ -1.04
EPHA4-205ENST00000419964 AFF2P51816 1311 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 UBN2Q6ZU65 1347 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 RNF113AO15541 343 aaKnown RBP8.56□□□□□ -1.04
EPHA4-205ENST00000419964 CTSHP09668 335 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 SLC5A1P13866 664 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 TIMM10P62072 90 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 RPS26P11Q5JNZ5 115 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-205ENST00000419964 CREB3L3Q68CJ9 461 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 TMED8Q6PL24 325 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-205ENST00000419964 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 RUFY3Q7L099 469 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 WFDC8Q8IUA0 241 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 C3orf58Q8NDZ4 430 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 TMX3Q96JJ7 454 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 GREM2Q9H772 168 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 ISY1Q9ULR0 285 aaKnown RBP8.56□□□□□ -1.04
EPHA4-205ENST00000419964 SOX13Q9UN79 622 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 LIMCH1Q9UPQ0 1083 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 RBM8AQ9Y5S9 174 aaKnown RBP8.56□□□□□ -1.04
EPHA4-205ENST00000419964 SCN7AQ01118 1682 aa8.56□□□□□ -1.04
EPHA4-205ENST00000419964 A0A0D9SFI3 127 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 GOLIM4O00461 696 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 TAF5LO75529 589 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 NTSR2O95665 410 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 RECKO95980 971 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 CASTP20810 708 aaKnown RBP8.55□□□□□ -1.04
EPHA4-205ENST00000419964 DGKGP49619 791 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-205ENST00000419964 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 SUSD4Q5VX71 490 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 BLOC1S2Q6QNY1 142 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 FAM227BQ96M60 508 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 JAKMIP1Q96N16 626 aaKnown RBP8.55□□□□□ -1.04
EPHA4-205ENST00000419964 CLEC4MQ9H2X3 399 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-205ENST00000419964 PDRG1Q9NUG6 133 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 CCNL1Q9UK58 526 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-205ENST00000419964 PALD1Q9ULE6 856 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 PPME1Q9Y570 386 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 ATP6V1DQ9Y5K8 247 aa8.55□□□□□ -1.04
EPHA4-205ENST00000419964 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 PIK3R2O00459 728 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 SLC27A2O14975 620 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 KCNQ2O43526 872 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 PDCP20941 246 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 ST13P50502 369 aaKnown RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 INSM1Q01101 510 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 SF3B3Q15393 1217 aaKnown RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 SLC10A5Q5PT55 438 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 MSL1Q68DK7 614 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 FAM196AQ6ZSG2 479 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 TNPO1Q92973 898 aaKnown RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 TTC14Q96N46 770 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms