RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 WNT10BO00744 389 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 ZBTB5O15062 677 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 EDIL3O43854 480 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 SLC1A4P43007 532 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 PTGER2P43116 358 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 PRELPP51888 382 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 NCAPHQ15003 741 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 NONOQ15233 471 aaKnown RBP eCLIP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 ZRSR1Q15695 479 aaKnown RBP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 NBPF9Q3BBW0 867 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 RBM26Q5T8P6 1007 aaKnown RBP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 SLFN13Q68D06 897 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 CIAPIN1Q6FI81 312 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 SH3RF1Q7Z6J0 888 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 IFNL1Q8IU54 200 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 REXO1Q8N1G1 1221 aaKnown RBP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 GMCL1P1Q8NEA9 526 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 SPATA20Q8TB22 786 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 DCAF4Q8WV16 495 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 TMEM39BQ9GZU3 492 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 BIN2Q9UBW5 565 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 PGAP2Q9UHJ9 254 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 ZKSCAN5Q9Y2L8 839 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 BECN2A8MW95 431 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 F5H6K3 240 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 RAD21O60216 631 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 EGFRP00533 1210 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 PTMAP06454 111 aaKnown RBP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 SLFN14P0C7P3 912 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 CLCN1P35523 988 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 ZNF75DP51815 510 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 ADCY7P51828 1080 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 KLRC3Q07444 240 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 FKBP1CQ5VVH2 108 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 NEK8Q86SG6 692 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 TBCKQ8TEA7 893 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 JDP2Q8WYK2 163 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 HSD3B7Q9H2F3 369 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 VEZTQ9HBM0 779 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 HOOK1Q9UJC3 728 aaKnown RBP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 MAN1B1Q9UKM7 699 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 BCS1LQ9Y276 419 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 CD2APQ9Y5K6 639 aa9.23□□□□□ -0.93
COL12A1-204ENST00000419671 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
COL12A1-204ENST00000419671 POLR2AP24928 1970 aaKnown RBP9.22□□□□□ -0.93
COL12A1-204ENST00000419671 CCNT1O60563 726 aaKnown RBP9.22□□□□□ -0.93
COL12A1-204ENST00000419671 NDUFB10O96000 172 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 CDC25AP30304 524 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 LONP1P36776 959 aaKnown RBP9.22□□□□□ -0.93
COL12A1-204ENST00000419671 PRPHP41219 470 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 LETM2Q2VYF4 491 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 JAKMIP3Q5VZ66 844 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 KANK3Q6NY19 840 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 PPP1R18Q6NYC8 613 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 FAM83AQ86UY5 434 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 SPC24Q8NBT2 197 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 PAGE5Q96GU1 130 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 NUP88Q99567 741 aaPredicted RBP9.22□□□□□ -0.93
COL12A1-204ENST00000419671 TRIM5Q9C035 493 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 MYOZ2Q9NPC6 264 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 RIC8AQ9NPQ8 531 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 PARP14Q460N5 1801 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 LTBP3Q9NS15 1303 aa9.22□□□□□ -0.93
COL12A1-204ENST00000419671 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.93
COL12A1-204ENST00000419671 PP2D1A8MPX8 630 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 LAD1O00515 517 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 TBC1D12O60347 775 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 CASP1P29466 404 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 ECE1P42892 770 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 RASSF7Q02833 373 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 MORC3Q14149 939 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 UBE2SQ16763 222 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 QRICH1Q2TAL8 776 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 KIAA1755Q5JYT7 1200 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 PDXDC2PQ6P474 469 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 DTHD1Q6ZMT9 781 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 ZNF830Q96NB3 372 aaPredicted RBP9.21□□□□□ -0.93
COL12A1-204ENST00000419671 MTRQ99707 1265 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.21□□□□□ -0.93
COL12A1-204ENST00000419671 SCAF8Q9UPN6 1271 aaKnown RBP9.21□□□□□ -0.93
COL12A1-204ENST00000419671 FARP1Q9Y4F1 1045 aaPredicted RBP9.21□□□□□ -0.93
COL12A1-204ENST00000419671 DOCK1Q14185 1865 aa9.21□□□□□ -0.93
COL12A1-204ENST00000419671 IKBKBO14920 756 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 MYO1BO43795 1136 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 NEMFO60524 1076 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 MSNP26038 577 aaKnown RBP9.21□□□□□ -0.94
COL12A1-204ENST00000419671 AFMP43652 599 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 ZNF280AP59817 542 aaPredicted RBP9.21□□□□□ -0.94
COL12A1-204ENST00000419671 MAP3K10Q02779 954 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 MFSD10Q14728 455 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 TNIP1Q15025 636 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 CDC37Q16543 378 aaPredicted RBP9.21□□□□□ -0.94
COL12A1-204ENST00000419671 MIGA2Q7L4E1 593 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.21□□□□□ -0.94
COL12A1-204ENST00000419671 NLGN2Q8NFZ4 835 aa9.21□□□□□ -0.94
COL12A1-204ENST00000419671 SMARCE1Q969G3 411 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms