RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 PROCP04070 461 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 STAT3P40763 770 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 IGBP1P78318 339 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 GABREP78334 506 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 USP53Q70EK8 1073 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 RNF180Q86T96 592 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 UBR7Q8N806 425 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 METTL22Q9BUU2 404 aaPredicted RBP7.22□□□□□ -1.25
RFC4-204ENST00000417876 TARS2Q9BW92 718 aaKnown RBP7.22□□□□□ -1.25
RFC4-204ENST00000417876 FOXP3Q9BZS1 431 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 ZC3H7BQ9UGR2 993 aaKnown RBP7.22□□□□□ -1.25
RFC4-204ENST00000417876 BACE2Q9Y5Z0 518 aa7.22□□□□□ -1.25
RFC4-204ENST00000417876 PDE8AO60658 829 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 SYPP08247 313 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 HOXA10P31260 410 aaPredicted RBP7.21□□□□□ -1.26
RFC4-204ENST00000417876 ZPBP2Q6X784 338 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 ARHGAP27Q6ZUM4 889 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 LRRTM3Q86VH5 581 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 JAMLQ86YT9 394 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 LINC00116Q8NCU8 138 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 ZCRB1Q8TBF4 217 aaKnown RBP7.21□□□□□ -1.26
RFC4-204ENST00000417876 TRIT1Q9H3H1 467 aaKnown RBP7.21□□□□□ -1.26
RFC4-204ENST00000417876 TCFL5Q9UL49 500 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 TNPO3Q9Y5L0 923 aaKnown RBP7.21□□□□□ -1.26
RFC4-204ENST00000417876 NPFFR2Q9Y5X5 522 aa7.21□□□□□ -1.26
RFC4-204ENST00000417876 TMEM82A0PJX8 343 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 CYP26A1O43174 497 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 MSCO60682 206 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 RASGRP1O95267 797 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 ESR1P03372 595 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 GSTM1P09488 218 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 LCP1P13796 627 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 PLS3P13797 630 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 IBSPP21815 317 aaPredicted RBP7.2□□□□□ -1.26
RFC4-204ENST00000417876 NOP2P46087 812 aaKnown RBP7.2□□□□□ -1.26
RFC4-204ENST00000417876 ZNF460Q14592 562 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 TAF7LQ5H9L4 462 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 STYK1Q6J9G0 422 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 CNNM4Q6P4Q7 775 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 PPIL6Q8IXY8 311 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 DDX1Q92499 740 aaKnown RBP7.2□□□□□ -1.26
RFC4-204ENST00000417876 TMX1Q9H3N1 280 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 ATP13A1Q9HD20 1204 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 CLEC1BQ9P126 229 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 PCDHA9Q9Y5H5 950 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 PCDHA11Q9Y5I1 949 aa7.2□□□□□ -1.26
RFC4-204ENST00000417876 FKTNO75072 461 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 CRTAMO95727 393 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 KCNA6P17658 529 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 CEBPAP49715 358 aaPredicted RBP7.19□□□□□ -1.26
RFC4-204ENST00000417876 CLCN7P51798 805 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 IFI16Q16666 785 aaKnown RBP7.19□□□□□ -1.26
RFC4-204ENST00000417876 MBLAC2Q68D91 279 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 RCSD1Q6JBY9 416 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 THAP5Q7Z6K1 395 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 TMEM52Q8NDY8 209 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 NETO1Q8TDF5 533 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 DCAF4Q8WV16 495 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 STAG1Q8WVM7 1258 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 MTFR1LQ9H019 292 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 INTS7Q9NVH2 962 aaKnown RBP7.19□□□□□ -1.26
RFC4-204ENST00000417876 MAGEC2Q9UBF1 373 aaPredicted RBP7.19□□□□□ -1.26
RFC4-204ENST00000417876 PITPNM2Q9BZ72 1349 aa7.19□□□□□ -1.26
RFC4-204ENST00000417876 TCRBV16S1A1N1A0A5B0 115 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 GSC2O15499 205 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 FGF10O15520 208 aaPredicted RBP7.18□□□□□ -1.26
RFC4-204ENST00000417876 DYRK3O43781 588 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 EFCAB14O75071 495 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 SEPHS1P49903 392 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 PCBP3P57721 371 aaKnown RBP7.18□□□□□ -1.26
RFC4-204ENST00000417876 ANAPC15P60006 121 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 PCBP1Q15365 356 aaKnown RBP eCLIP7.18□□□□□ -1.26
RFC4-204ENST00000417876 TESK1Q15569 626 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 INF2Q27J81 1249 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 ACBD5Q5T8D3 534 aaPredicted RBP7.18□□□□□ -1.26
RFC4-204ENST00000417876 ABHD17CQ6PCB6 329 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 MAMDC2Q7Z304 686 aaPredicted RBP7.18□□□□□ -1.26
RFC4-204ENST00000417876 STRA8Q7Z7C7 330 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 SPOCK3Q9BQ16 436 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 PHF20Q9BVI0 1012 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 PCGF6Q9BYE7 350 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 PIM2Q9P1W9 311 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 DUSP13Q9UII6 198 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 RNF112Q9ULX5 631 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 ZNF281Q9Y2X9 895 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 PCDHA8Q9Y5H6 950 aa7.18□□□□□ -1.26
RFC4-204ENST00000417876 RAB11FIP3O75154 756 aa7.17□□□□□ -1.26
RFC4-204ENST00000417876 FOSL1P15407 271 aa7.17□□□□□ -1.26
RFC4-204ENST00000417876 CDKN1CP49918 316 aaPredicted RBP7.17□□□□□ -1.26
RFC4-204ENST00000417876 EVA1CP58658 441 aa7.17□□□□□ -1.26
RFC4-204ENST00000417876 TEKQ02763 1124 aa7.17□□□□□ -1.26
RFC4-204ENST00000417876 CPSF6Q16630 551 aaKnown RBP eCLIP7.17□□□□□ -1.262e-9■□□□□ 10.6
RFC4-204ENST00000417876 CREG2Q8IUH2 290 aa7.17□□□□□ -1.26
RFC4-204ENST00000417876 CHAC2Q8WUX2 184 aa7.17□□□□□ -1.26
RFC4-204ENST00000417876 SNX11Q9Y5W9 270 aa7.17□□□□□ -1.26
RFC4-204ENST00000417876 TMEM265A0A087WTH1 108 aa7.16□□□□□ -1.26
RFC4-204ENST00000417876 MEFVO15553 781 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms