RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 CFAP45Q9UL16 551 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 LAMA2P24043 3122 aaKnown RBP13.63□□□□□ -0.23
GABRE-202ENST00000417300 BTBD18B2RXH4 712 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 STXBP3O00186 592 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
GABRE-202ENST00000417300 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
GABRE-202ENST00000417300 TTBK2Q6IQ55 1244 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.63□□□□□ -0.23
GABRE-202ENST00000417300 CCDC12Q8WUD4 166 aaPredicted RBP13.63□□□□□ -0.23
GABRE-202ENST00000417300 CLMNQ96JQ2 1002 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 PIGSQ96S52 555 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 ANP32EQ9BTT0 268 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 WDR18Q9BV38 432 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 KIAA1683Q9H0B3 1180 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 JMJD4Q9H9V9 463 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.63□□□□□ -0.23
GABRE-202ENST00000417300 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
GABRE-202ENST00000417300 ZMYND8Q9ULU4 1186 aaPredicted RBP13.63□□□□□ -0.23
GABRE-202ENST00000417300 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
GABRE-202ENST00000417300 CACNA1AO00555 2505 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 PNMA6FA0A0J9YX94 578 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
GABRE-202ENST00000417300 TRAK2O60296 914 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 PLA2G6O60733 806 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 NLRP5P59047 1200 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 HEATR3Q7Z4Q2 680 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 HOMER1Q86YM7 354 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
GABRE-202ENST00000417300 LEO1Q8WVC0 666 aaPredicted RBP13.62□□□□□ -0.23
GABRE-202ENST00000417300 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.23
GABRE-202ENST00000417300 TNFRSF25Q93038 417 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 UBE2OQ9C0C9 1292 aaKnown RBP13.62□□□□□ -0.23
GABRE-202ENST00000417300 ARHGAP39Q9C0H5 1083 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 AS3MTQ9HBK9 375 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 POLR3EQ9NVU0 708 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 RTEL1Q9NZ71 1219 aa13.62□□□□□ -0.23
GABRE-202ENST00000417300 ZBTB5O15062 677 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 RAD21O60216 631 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 USP2O75604 605 aaPredicted RBP13.61□□□□□ -0.23
GABRE-202ENST00000417300 YEATS4O95619 227 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 MBD3O95983 291 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
GABRE-202ENST00000417300 NR5A1Q13285 461 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 KLHL40Q2TBA0 621 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 TJAP1Q5JTD0 557 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 KIAA1755Q5JYT7 1200 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 SYDE2Q5VT97 1194 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 CCDC84Q86UT8 332 aaPredicted RBP13.61□□□□□ -0.23
GABRE-202ENST00000417300 C7orf61Q8IZ16 206 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 OXER1Q8TDS5 423 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 LPAR1Q92633 364 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 SPATA32Q96LK8 384 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 NUP88Q99567 741 aaPredicted RBP13.61□□□□□ -0.23
GABRE-202ENST00000417300 FEZ1Q99689 392 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 ZMYND12Q9H0C1 365 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 VAT1LQ9HCJ6 419 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 PICK1Q9NRD5 415 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 TFIP11Q9UBB9 837 aaKnown RBP13.61□□□□□ -0.23
GABRE-202ENST00000417300 RCOR1Q9UKL0 485 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 PCDHA4Q9UN74 947 aa13.61□□□□□ -0.23
GABRE-202ENST00000417300 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 TMEM232C9JQI7 657 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 M0R2N6 131 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 WDR46O15213 610 aaKnown RBP13.6□□□□□ -0.23
GABRE-202ENST00000417300 PPP1R12BO60237 982 aaPredicted RBP13.6□□□□□ -0.23
GABRE-202ENST00000417300 PTPRAP18433 802 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 GRK4P32298 578 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 SLC16A2P36021 539 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 MAGEA10P43363 369 aaPredicted RBP13.6□□□□□ -0.23
GABRE-202ENST00000417300 STAT2P52630 851 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 USP14P54578 494 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 NAPAP54920 295 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 UBE2HP62256 183 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 UBXN2AP68543 259 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 LACTBP83111 547 aaPredicted RBP13.6□□□□□ -0.23
GABRE-202ENST00000417300 RILPL1Q5EBL4 403 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 FAM160B2Q86V87 743 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 BLIDQ8IZY5 108 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 RAET1EQ8TD07 263 aa13.6□□□□□ -0.23
GABRE-202ENST00000417300 ISY1Q9ULR0 285 aaKnown RBP13.6□□□□□ -0.23
GABRE-202ENST00000417300 UNCXA6NJT0 531 aa13.59□□□□□ -0.23
GABRE-202ENST00000417300 SGPL1O95470 568 aa13.59□□□□□ -0.23
GABRE-202ENST00000417300 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
GABRE-202ENST00000417300 GNA11P29992 359 aa13.59□□□□□ -0.23
GABRE-202ENST00000417300 MAP3K9P80192 1104 aa13.59□□□□□ -0.23
GABRE-202ENST00000417300 CDC37Q16543 378 aaPredicted RBP13.59□□□□□ -0.23
GABRE-202ENST00000417300 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms