RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 FAM153BP0C7A2 387 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 CCNHP51946 323 aaPredicted RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 SPAG1Q07617 926 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 FAM153CQ494X1 144 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 WLSQ5T9L3 541 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 EMBQ6PCB8 327 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 CREG2Q8IUH2 290 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 FUKQ8N0W3 1084 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 GSDMAQ96QA5 445 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 LRWD1Q9UFC0 647 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 FAM153AQ9UHL3 310 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 COL14A1Q05707 1796 aaKnown RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 ZNF233A6NK53 670 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 ZAP70P43403 619 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 INTS5Q6P9B9 1019 aaKnown RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 FAM228AQ86W67 206 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 MLXIPQ9HAP2 919 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 BCCIPQ9P287 314 aaKnown RBP eCLIP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 BAIAP2L1Q9UHR4 511 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 USP21Q9UK80 565 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 CEP131Q9UPN4 1083 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 CARSP49589 748 aaKnown RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 NHEJ1Q9H9Q4 299 aaPredicted RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 CAPN6Q9Y6Q1 641 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 NCK2O43639 380 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 MOCS3O95396 460 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 MDH1P40925 334 aaKnown RBP16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 KDM7AQ6ZMT4 941 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 MMGT1Q8N4V1 131 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 ANKRD13CQ8N6S4 541 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 CYFIP2Q96F07 1278 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 RIPOR2Q9Y4F9 1068 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 PCCAP05165 728 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 YTHDF3Q7Z739 585 aaKnown RBP16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
NCKIPSD-204ENST00000416649 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 DNM1LO00429 736 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 FAM107AO95990 144 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 PAFAH1B1P43034 410 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 KLK7P49862 253 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 MRPL12P52815 198 aaKnown RBP16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 GUCY2DQ02846 1103 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 APPBP2Q92624 585 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 EPB41L5Q9HCM4 733 aa16.33■□□□□ 0.21
NCKIPSD-204ENST00000416649 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
NCKIPSD-204ENST00000416649 SPA17Q15506 151 aa16.33■□□□□ 0.2
NCKIPSD-204ENST00000416649 ODF2Q5BJF6 829 aa16.33■□□□□ 0.2
NCKIPSD-204ENST00000416649 MB21D1Q8N884 522 aa16.33■□□□□ 0.2
NCKIPSD-204ENST00000416649 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
NCKIPSD-204ENST00000416649 THOC1Q96FV9 657 aaKnown RBP16.33■□□□□ 0.2
NCKIPSD-204ENST00000416649 ANO9A1A5B4 782 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 TACC1O75410 805 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 ERCC3P19447 782 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 ZNF174Q15697 407 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 WASF1Q92558 559 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 RBM12Q9NTZ6 932 aaKnown RBP16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 B4DLN1 442 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 CDC25CP30307 473 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 MS4A14Q96JA4 679 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 OSBPL9Q96SU4 736 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 OSBPL7Q9BZF2 842 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 KCTD19Q17RG1 926 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 SLC4A8Q2Y0W8 1093 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 SPDL1Q96EA4 605 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 CCDC42Q96M95 316 aa16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 IQSEC3Q9UPP2 1182 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-204ENST00000416649 GOLGA6L10A6NI86 522 aa16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 LRRC10BA6NIK2 292 aa16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 SMIM22K7EJ46 135 aa16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 PLEKP08567 350 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 TMOD1P28289 359 aa16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 CTSWP56202 376 aa16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-204ENST00000416649 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms