RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 FGD4Q96M96 766 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 SEZ6LQ9BYH1 1024 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 PNMA2Q9UL42 364 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 ZNF536O15090 1300 aa13.39□□□□□ -0.27
SNX30-202ENST00000416585 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
SNX30-202ENST00000416585 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 ADCY6O43306 1168 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 ORC4O43929 436 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 NMT2O60551 498 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 TOP1P11387 765 aaKnown RBP13.38□□□□□ -0.27
SNX30-202ENST00000416585 DNAJB2P25686 324 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 EPHB4P54760 987 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 SNAP25P60880 206 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 FSCN1Q16658 493 aaKnown RBP13.38□□□□□ -0.27
SNX30-202ENST00000416585 MCMDC2Q4G0Z9 681 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 IQSEC1Q6DN90 963 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 EEPD1Q7L9B9 569 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX30-202ENST00000416585 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 CYP39A1Q9NYL5 469 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 TBX21Q9UL17 535 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 SCN5AQ14524 2016 aa13.38□□□□□ -0.27
SNX30-202ENST00000416585 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.37□□□□□ -0.27
SNX30-202ENST00000416585 PTPDC1A2A3K4 754 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 DYNC1LI2O43237 492 aaPredicted RBP13.37□□□□□ -0.27
SNX30-202ENST00000416585 ICAM1P05362 532 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 CDK7P50613 346 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 PDE1AP54750 535 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
SNX30-202ENST00000416585 MUM1L1Q5H9M0 696 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 VPS53Q5VIR6 699 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 CXCL17Q6UXB2 119 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 KIAA1211Q6ZU35 1233 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
SNX30-202ENST00000416585 FAM126BQ8IXS8 530 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 TIFAQ96CG3 184 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 GAS2L1Q99501 681 aaPredicted RBP13.37□□□□□ -0.27
SNX30-202ENST00000416585 KATNBL1Q9H079 304 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
SNX30-202ENST00000416585 IL17RBQ9NRM6 502 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 Q9Y3F1 56 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
SNX30-202ENST00000416585 RAD50Q92878 1312 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 SALL3Q9BXA9 1300 aa13.37□□□□□ -0.27
SNX30-202ENST00000416585 B4DLN1 442 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 CSF2RAP15509 400 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 SLC16A2P36021 539 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 MRPL12P52815 198 aaKnown RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 ITGA7Q13683 1181 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 ALX1Q15699 326 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 MFSD6Q6ZSS7 791 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 TICAM2Q86XR7 235 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 RANBP17Q9H2T7 1088 aaKnown RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 HIPK3Q9H422 1215 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 INCENPQ9NQS7 918 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
SNX30-202ENST00000416585 ZMYM6O95789 1325 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 CCDC171Q6TFL3 1326 aa13.36□□□□□ -0.27
SNX30-202ENST00000416585 LOC102724159A0A0B4J2E5 919 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 A0A0D9SFI3 127 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 SMPD1P17405 629 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 CALML3P27482 149 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 CPT1AP50416 773 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 ALDH5A1P51649 535 aaPredicted RBP13.35□□□□□ -0.27
SNX30-202ENST00000416585 HAND2P61296 217 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 NKX3-2P78367 333 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
SNX30-202ENST00000416585 PWP2Q15269 919 aaKnown RBP13.35□□□□□ -0.27
SNX30-202ENST00000416585 RAB30Q15771 203 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 RNF207Q6ZRF8 634 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 RASGRP2Q7LDG7 609 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 FAM227BQ96M60 508 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 ZNF576Q9H609 170 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 IL23AQ9NPF7 189 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
SNX30-202ENST00000416585 SCN10AQ9Y5Y9 1956 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 FOXP2O15409 715 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 FGAP02671 866 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 FGBP02675 491 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 ACRP10323 421 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 HSPD1P10809 573 aaKnown RBP13.34□□□□□ -0.27
SNX30-202ENST00000416585 CYP2C18P33260 490 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 PDE4DQ08499 809 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 NMIQ13287 307 aaPredicted RBP13.34□□□□□ -0.27
SNX30-202ENST00000416585 BAATQ14032 418 aaPredicted RBP13.34□□□□□ -0.27
SNX30-202ENST00000416585 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
SNX30-202ENST00000416585 AKNAD1Q5T1N1 836 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms