RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 DUSP10Q9Y6W6 482 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
LINC00475-202ENST00000416438 NAPAP54920 295 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 NFIXQ14938 502 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 TSR1Q2NL82 804 aaKnown RBP16.5■□□□□ 0.23
LINC00475-202ENST00000416438 SPTY2D1Q68D10 685 aaPredicted RBP16.5■□□□□ 0.23
LINC00475-202ENST00000416438 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 CAPZA3Q96KX2 299 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 LACRTQ9GZZ8 138 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 VPS18Q9P253 973 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 FLT1P17948 1338 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 IRS2Q9Y4H2 1338 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 A0A1W2PQC6 194 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 ZPR1O75312 459 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 RASA1P20936 1047 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 TBC1D8BQ0IIM8 1120 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 PCMTD1Q96MG8 357 aaPredicted RBP16.49■□□□□ 0.23
LINC00475-202ENST00000416438 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 SMCO2A6NFE2 343 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 ERLIN1O75477 346 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 SRGNP10124 158 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 LMAN1P49257 510 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 DNM2P50570 870 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 ASIC1P78348 528 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 CYP27A1Q02318 531 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 TRAPPC11Q7Z392 1133 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 DAGLBQ8NCG7 672 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 TRIM9Q9C026 710 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 HAUS4Q9H6D7 363 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 TCP11L1Q9NUJ3 509 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 EXOC1Q9NV70 894 aa16.49■□□□□ 0.23
LINC00475-202ENST00000416438 KIAA1328Q86T90 577 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 P2RX5Q93086 422 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 CNOT6LQ96LI5 555 aaKnown RBP16.48■□□□□ 0.23
LINC00475-202ENST00000416438 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 PHACTR2O75167 634 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 OR52Z1P0C646 297 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 ERCC3P19447 782 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 CASP8Q14790 479 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
LINC00475-202ENST00000416438 BIN2Q9UBW5 565 aaPredicted RBP16.48■□□□□ 0.23
LINC00475-202ENST00000416438 LRRIQ3A6PVS8 624 aaPredicted RBP16.47■□□□□ 0.23
LINC00475-202ENST00000416438 MTIF2P46199 727 aaKnown RBP16.47■□□□□ 0.23
LINC00475-202ENST00000416438 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
LINC00475-202ENST00000416438 TTYH3Q9C0H2 523 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 ZMYND12Q9H0C1 365 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 NHEJ1Q9H9Q4 299 aaPredicted RBP16.47■□□□□ 0.23
LINC00475-202ENST00000416438 SLC39A2Q9NP94 309 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 TMEM260Q9NX78 707 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 PSMD14O00487 310 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 ZNF185O15231 689 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 ZMYND10O75800 440 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 BAG3O95817 575 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 CCNE1P24864 410 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 WDR66Q8TBY9 1149 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 JAKMIP2Q96AA8 810 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 NGLY1Q96IV0 654 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 HINFPQ9BQA5 517 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 MMTAG2Q9BU76 263 aaKnown RBP16.47■□□□□ 0.23
LINC00475-202ENST00000416438 NOC4LQ9BVI4 516 aaKnown RBP16.47■□□□□ 0.23
LINC00475-202ENST00000416438 FAN1Q9Y2M0 1017 aa16.47■□□□□ 0.23
LINC00475-202ENST00000416438 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
LINC00475-202ENST00000416438 PRPHP41219 470 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 TXKP42681 527 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 CDK8P49336 464 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 NONOQ15233 471 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC00475-202ENST00000416438 MIIPQ5JXC2 388 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 TXLNBQ8N3L3 684 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 TBCKQ8TEA7 893 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 GDAP1L1Q96MZ0 367 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 PIGSQ96S52 555 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 EYA3Q99504 573 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 SAR1BQ9Y6B6 198 aa16.46■□□□□ 0.23
LINC00475-202ENST00000416438 MACROD2A1Z1Q3 448 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 GPS2Q13227 327 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 MEA1Q16626 185 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 GALNT17Q6IS24 598 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 POTEDQ86YR6 584 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 KIAA0895Q8NCT3 520 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.22
LINC00475-202ENST00000416438 CCDC102AQ96A19 550 aa16.46■□□□□ 0.22
LINC00475-202ENST00000416438 LAMB1P07942 1786 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 LAD1O00515 517 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 MYL1P05976 194 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 BTDP43251 543 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
LINC00475-202ENST00000416438 SEMA6BQ9H3T3 888 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 KRT83P78385 493 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 DYMQ7RTS9 669 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 NEK8Q86SG6 692 aa16.45■□□□□ 0.22
LINC00475-202ENST00000416438 RTFDC1Q9BY42 306 aaPredicted RBP16.45■□□□□ 0.22
LINC00475-202ENST00000416438 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms