RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-202ENST00000415828 USP31Q70CQ4 1352 aa7.41□□□□□ -1.22
CSTF1-202ENST00000415828 LTN1O94822 1766 aa7.41□□□□□ -1.22
CSTF1-202ENST00000415828 AFDNP55196 1824 aaKnown RBP7.41□□□□□ -1.22
CSTF1-202ENST00000415828 DCDC2CA8MYV0 355 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 PAX4O43316 350 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 PRNPP04156 253 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 HCLS1P14317 486 aaPredicted RBP7.4□□□□□ -1.22
CSTF1-202ENST00000415828 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 NFXL1Q6ZNB6 911 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 VSIG10LQ86VR7 867 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 SSU72Q9NP77 194 aaKnown RBP7.4□□□□□ -1.22
CSTF1-202ENST00000415828 ADGRE2Q9UHX3 823 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 PCDHB5Q9Y5E4 795 aa7.4□□□□□ -1.22
CSTF1-202ENST00000415828 SEPT6Q14141 434 aa7.39□□□□□ -1.23
CSTF1-202ENST00000415828 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
CSTF1-202ENST00000415828 DALRD3Q5D0E6 543 aaKnown RBP7.39□□□□□ -1.23
CSTF1-202ENST00000415828 C12orf40Q86WS4 652 aa7.39□□□□□ -1.23
CSTF1-202ENST00000415828 TP53INP2Q8IXH6 220 aa7.39□□□□□ -1.23
CSTF1-202ENST00000415828 SMYD4Q8IYR2 804 aaPredicted RBP7.39□□□□□ -1.23
CSTF1-202ENST00000415828 FLAD1Q8NFF5 587 aa7.39□□□□□ -1.23
CSTF1-202ENST00000415828 ELMO3Q96BJ8 720 aa7.39□□□□□ -1.23
CSTF1-202ENST00000415828 NOC4LQ9BVI4 516 aaKnown RBP7.39□□□□□ -1.23
CSTF1-202ENST00000415828 TLR6Q9Y2C9 796 aa7.39□□□□□ -1.23
CSTF1-202ENST00000415828 RPGRIP1LQ68CZ1 1315 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
CSTF1-202ENST00000415828 FAM87AP0C7U9 286 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 RLBP1P12271 317 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 RPS26P62854 115 aaKnown RBP7.38□□□□□ -1.23
CSTF1-202ENST00000415828 PTPN11Q06124 597 aaPredicted RBP7.38□□□□□ -1.23
CSTF1-202ENST00000415828 ZC3H12AQ5D1E8 599 aaKnown RBP7.38□□□□□ -1.23
CSTF1-202ENST00000415828 PPM1JQ5JR12 505 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 LDHDQ86WU2 507 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 FBXL18Q96ME1 805 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 MIR1-1HGQ9H1L0 117 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 PODXL2Q9NZ53 605 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 TTC28Q96AY4 2481 aa7.38□□□□□ -1.23
CSTF1-202ENST00000415828 PIK3C2GO75747 1445 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 CPSF1Q10570 1443 aaKnown RBP7.37□□□□□ -1.23
CSTF1-202ENST00000415828 ANKRD36BQ8N2N9 1353 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 CCDC7Q96M83 1385 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 DDNO94850 711 aaPredicted RBP7.37□□□□□ -1.23
CSTF1-202ENST00000415828 TFE3P19532 575 aaPredicted RBP7.37□□□□□ -1.23
CSTF1-202ENST00000415828 CHRNA5P30532 468 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 CYP27C1Q4G0S4 372 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 AGMOQ6ZNB7 445 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 RELL1Q8IUW5 271 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 TMEM87AQ8NBN3 555 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 RGS22Q8NE09 1264 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 FLCNQ8NFG4 579 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 JARID2Q92833 1246 aaPredicted RBP7.37□□□□□ -1.23
CSTF1-202ENST00000415828 GAL3ST3Q96A11 431 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 SNX27Q96L92 541 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 CACNA2D2Q9NY47 1150 aa7.37□□□□□ -1.23
CSTF1-202ENST00000415828 ACEP12821 1306 aa7.36□□□□□ -1.23
CSTF1-202ENST00000415828 PRAMEF27A3QJZ7 478 aa7.36□□□□□ -1.23
CSTF1-202ENST00000415828 NEFMP07197 916 aa7.36□□□□□ -1.23
CSTF1-202ENST00000415828 GBP2P32456 591 aaPredicted RBP7.36□□□□□ -1.23
CSTF1-202ENST00000415828 PLA2G5P39877 138 aa7.36□□□□□ -1.23
CSTF1-202ENST00000415828 INPP5AQ14642 412 aa7.36□□□□□ -1.23
CSTF1-202ENST00000415828 LRFN4Q6PJG9 635 aa7.36□□□□□ -1.23
CSTF1-202ENST00000415828 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.36□□□□□ -1.23
CSTF1-202ENST00000415828 PCOLCE2Q9UKZ9 415 aa7.36□□□□□ -1.23
CSTF1-202ENST00000415828 POLR3AO14802 1390 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-202ENST00000415828 MINDY4BA8MYZ0 360 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 CDK8P49336 464 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 ERVK-24P63145 666 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 TSNAXIP1Q2TAA8 658 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 WIPI1Q5MNZ9 446 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-202ENST00000415828 SCARA3Q6AZY7 606 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 CIAPIN1Q6FI81 312 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 HDXQ7Z353 690 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 FAM181AQ8N9Y4 354 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 RNF214Q8ND24 703 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 PHC3Q8NDX5 983 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 ISL2Q96A47 359 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 PLPPR2Q96GM1 343 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 GOLGA2P5Q9HBQ8 144 aa7.35□□□□□ -1.23
CSTF1-202ENST00000415828 PAK6Q9NQU5 681 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-202ENST00000415828 MYH14Q7Z406 1995 aaKnown RBP7.35□□□□□ -1.23
CSTF1-202ENST00000415828 USP47Q96K76 1375 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 CA12O43570 354 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 LEFTY1O75610 366 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 IL2RBP14784 551 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 MAP2K2P36507 400 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 ECE1P42892 770 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.23
CSTF1-202ENST00000415828 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
CSTF1-202ENST00000415828 PLD6Q8N2A8 252 aaKnown RBP7.34□□□□□ -1.23
CSTF1-202ENST00000415828 TAF1DQ9H5J8 278 aaPredicted RBP7.34□□□□□ -1.23
CSTF1-202ENST00000415828 POGKQ9P215 609 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 GGT7Q9UJ14 662 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 RNF114Q9Y508 228 aa7.34□□□□□ -1.23
CSTF1-202ENST00000415828 PF4P02776 101 aa7.33□□□□□ -1.24
CSTF1-202ENST00000415828 FAM160A1Q05DH4 1040 aa7.33□□□□□ -1.24
CSTF1-202ENST00000415828 CAMK2GQ13555 558 aaPredicted RBP7.33□□□□□ -1.24
CSTF1-202ENST00000415828 PWP1Q13610 501 aa7.33□□□□□ -1.24
CSTF1-202ENST00000415828 CDC37L1Q7L3B6 337 aa7.33□□□□□ -1.24
CSTF1-202ENST00000415828 CNTROBQ8N137 903 aa7.33□□□□□ -1.24
CSTF1-202ENST00000415828 BCL7CQ8WUZ0 217 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms