RNA–Protein interactions for RNA: ENST00000415489.1

PNPT1-203, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 3

Gene PNPT1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-203ENST00000415489 ZNF227Q86WZ6 799 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 JAMLQ86YT9 394 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 POU5F2Q8N7G0 328 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 COPS5Q92905 334 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 ARMC5Q96C12 935 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 INTS4Q96HW7 963 aaKnown RBP6.93□□□□□ -1.3
PNPT1-203ENST00000415489 HIRIP3Q9BW71 556 aaPredicted RBP6.93□□□□□ -1.3
PNPT1-203ENST00000415489 SLC6A17Q9H1V8 727 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 EPN3Q9H201 632 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 NKX2-4Q9H2Z4 354 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 NSUN3Q9H649 340 aaKnown RBP6.93□□□□□ -1.3
PNPT1-203ENST00000415489 GPRC5CQ9NQ84 441 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 TAF6LQ9Y6J9 622 aa6.93□□□□□ -1.3
PNPT1-203ENST00000415489 FARP2O94887 1054 aaPredicted RBP6.92□□□□□ -1.3
PNPT1-203ENST00000415489 CAPNS1P04632 268 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 HOXC12P31275 282 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 MVKQ03426 396 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 SCRN1Q12765 414 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 CPNE8Q86YQ8 564 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 NLGN2Q8NFZ4 835 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 BTN2A2Q8WVV5 523 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 IMPACTQ9P2X3 320 aa6.92□□□□□ -1.3
PNPT1-203ENST00000415489 MSL3P1P0C860 447 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 PAMP19021 973 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 L1CAMP32004 1257 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 PDE6BP35913 854 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 CYP4F8P98187 520 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 LAPTM5Q13571 262 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 SF1Q15637 639 aaKnown RBP6.91□□□□□ -1.3
PNPT1-203ENST00000415489 ZNF648Q5T619 568 aaPredicted RBP6.91□□□□□ -1.3
PNPT1-203ENST00000415489 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 IRF2BP1Q8IU81 584 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 NUP43Q8NFH3 380 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 ZNF552Q9H707 407 aaPredicted RBP6.91□□□□□ -1.3
PNPT1-203ENST00000415489 DCP1AQ9NPI6 582 aaPredicted RBP6.91□□□□□ -1.3
PNPT1-203ENST00000415489 MSRB2Q9Y3D2 182 aa6.91□□□□□ -1.3
PNPT1-203ENST00000415489 NPHP3-ACAD11A0A0J9YXS1 232 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 A0A1W2PQ27 194 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 A0A1W2PQ64 194 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 A0A1W2PQC6 194 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 A0A1W2PQD8 194 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 A0A1W2PQU0 124 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 ARNTLO00327 626 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 U2SURPO15042 1029 aaKnown RBP6.9□□□□□ -1.3
PNPT1-203ENST00000415489 PPP1R11O60927 126 aaPredicted RBP6.9□□□□□ -1.3
PNPT1-203ENST00000415489 THBDP07204 575 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 PLS3P13797 630 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 SDHBP21912 280 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
PNPT1-203ENST00000415489 KSR1Q8IVT5 923 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 FAM84AQ96KN4 292 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 CCDC113Q9H0I3 377 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 CLEC1BQ9P126 229 aa6.9□□□□□ -1.3
PNPT1-203ENST00000415489 OR14I1A6ND48 311 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 AGRPO00253 132 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 GRIA2P42262 883 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 ERVFRD-1P60508 538 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 ADGRF1Q5T601 910 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 FBXO15Q8NCQ5 510 aaPredicted RBP6.89□□□□□ -1.31
PNPT1-203ENST00000415489 ST13P5Q8NFI4 369 aaPredicted RBP6.89□□□□□ -1.31
PNPT1-203ENST00000415489 FRS2Q8WU20 508 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 SIRPGQ9P1W8 387 aa6.89□□□□□ -1.31
PNPT1-203ENST00000415489 PDPK1O15530 556 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 SCG5P05408 212 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
PNPT1-203ENST00000415489 ARL4AP40617 200 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 ECI1P42126 302 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 PPP2R2AP63151 447 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 ZNF605Q86T29 641 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 KREMEN2Q8NCW0 462 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 NPLOC4Q8TAT6 608 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 SREK1Q8WXA9 508 aaKnown RBP6.88□□□□□ -1.31
PNPT1-203ENST00000415489 SGSM3Q96HU1 749 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 MMP19Q99542 508 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 PDLIM7Q9NR12 457 aa6.88□□□□□ -1.31
PNPT1-203ENST00000415489 TRBV23OR9-2A0A075B6M9 112 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 MYOCOSA0A1B0GUC4 107 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 C7orf72A4D263 438 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 CPP00450 1065 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 MPOP05164 745 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 SERINC3Q13530 473 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 SYDE1Q6ZW31 735 aaPredicted RBP6.87□□□□□ -1.31
PNPT1-203ENST00000415489 KCNN1Q92952 543 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 KLHL14Q9P2G3 628 aa6.87□□□□□ -1.31
PNPT1-203ENST00000415489 TMEFF2Q9UIK5 374 aaPredicted RBP6.87□□□□□ -1.31
PNPT1-203ENST00000415489 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 KCNJ6P48051 423 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 GFRA1P56159 465 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 CORO7P57737 925 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
PNPT1-203ENST00000415489 RASGRF1Q13972 1273 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 HSP90AA2PQ14568 343 aaPredicted RBP6.86□□□□□ -1.31
PNPT1-203ENST00000415489 INF2Q27J81 1249 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 PRSS53Q2L4Q9 553 aa6.86□□□□□ -1.31
PNPT1-203ENST00000415489 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms