RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 TRIM75PA6NK02 468 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 ZBTB5O15062 677 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 CUTAO60888 179 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 BMP3P12645 472 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
RFFL-205ENST00000415395 CMA1P23946 247 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 CCZ1BP86790 482 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 CCZ1P86791 482 aaPredicted RBP13.12□□□□□ -0.31
RFFL-205ENST00000415395 ANGEL2Q5VTE6 544 aaKnown RBP13.12□□□□□ -0.31
RFFL-205ENST00000415395 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 GLT8D2Q9H1C3 349 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
RFFL-205ENST00000415395 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 IKBKBO14920 756 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 PLA2G6O60733 806 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 SMC2O95347 1197 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
RFFL-205ENST00000415395 EPS15P42566 896 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 AXDND1Q5T1B0 1012 aaPredicted RBP13.11□□□□□ -0.31
RFFL-205ENST00000415395 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 KRT25Q7Z3Z0 450 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 CREBRFQ8IUR6 639 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 ZNF341Q9BYN7 854 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 VCPKMTQ9H867 229 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 VAT1LQ9HCJ6 419 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
RFFL-205ENST00000415395 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
RFFL-205ENST00000415395 SCN4AP35499 1836 aa13.11□□□□□ -0.31
RFFL-205ENST00000415395 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 TRAF1Q13077 416 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
RFFL-205ENST00000415395 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
RFFL-205ENST00000415395 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
RFFL-205ENST00000415395 PRDM10Q9NQV6 1147 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 GGA3Q9NZ52 723 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 ZNF112Q9UJU3 913 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 PCDHB6Q9Y5E3 794 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 POLR2AP24928 1970 aaKnown RBP13.1□□□□□ -0.31
RFFL-205ENST00000415395 FAM237AA0A1B0GTK4 181 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 GRIN3BO60391 1043 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
RFFL-205ENST00000415395 PTPREP23469 700 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 ORC2Q13416 577 aaPredicted RBP13.1□□□□□ -0.31
RFFL-205ENST00000415395 TTC38Q5R3I4 469 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 PIK3AP1Q6ZUJ8 805 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 DDX41Q9UJV9 622 aaKnown RBP13.1□□□□□ -0.31
RFFL-205ENST00000415395 PCDHA6Q9UN73 950 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 PCDHA8Q9Y5H6 950 aa13.1□□□□□ -0.31
RFFL-205ENST00000415395 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 RAD21O60216 631 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 ECE1P42892 770 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 ADCY7P51828 1080 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 NDUFA8P51970 172 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 STAT2P52630 851 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
RFFL-205ENST00000415395 SUPT20HL1Q3ZLR7 823 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
RFFL-205ENST00000415395 NBPF12Q5TAG4 269 aaPredicted RBP13.09□□□□□ -0.31
RFFL-205ENST00000415395 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 KRT222Q8N1A0 295 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 CHURC1Q8WUH1 139 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 LPAR1Q92633 364 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 FERMT2Q96AC1 680 aa13.09□□□□□ -0.31
RFFL-205ENST00000415395 SRPRBQ9Y5M8 271 aaKnown RBP13.09□□□□□ -0.31
RFFL-205ENST00000415395 A0A1B0GVL5 298 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 ZNF202O95125 648 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 MARCKSP29966 332 aaPredicted RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 SLC16A2P36021 539 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 TMC6Q7Z403 805 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 FCHSD1Q86WN1 690 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 REXO1Q8N1G1 1221 aaKnown RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 KIAA1683Q9H0B3 1180 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 RIC8AQ9NPQ8 531 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 TMEM232C9JQI7 657 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 TPM1P09493 284 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 MRPL12P52815 198 aaKnown RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 ATP2C1P98194 919 aaPredicted RBP13.08□□□□□ -0.32
RFFL-205ENST00000415395 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.32
RFFL-205ENST00000415395 QRICH1Q2TAL8 776 aa13.08□□□□□ -0.32
RFFL-205ENST00000415395 RESP18Q5W5W9 173 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms