RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NUP88Q99567 741 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-208ENST00000414711 ZBED2Q9BTP6 218 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 UPF3BQ9BZI7 483 aaKnown RBP19.04■□□□□ 0.64
CPNE1-208ENST00000414711 NOB1Q9ULX3 412 aaKnown RBP19.04■□□□□ 0.64
CPNE1-208ENST00000414711 ZFHX2Q9C0A1 2572 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-208ENST00000414711 SIP14410 1827 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 PITPNM1O00562 1244 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 WDR5P61964 334 aaKnown RBP19.03■□□□□ 0.64
CPNE1-208ENST00000414711 IER5LQ5T953 404 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 ADHFE1Q8IWW8 467 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.03■□□□□ 0.64
CPNE1-208ENST00000414711 SDR42E1Q8WUS8 393 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 PRRX2Q99811 253 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 ANTXR1Q9H6X2 564 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 DCP1AQ9NPI6 582 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-208ENST00000414711 FBXO40Q9UH90 709 aa19.03■□□□□ 0.64
CPNE1-208ENST00000414711 DBNLQ9UJU6 430 aaKnown RBP19.03■□□□□ 0.64
CPNE1-208ENST00000414711 TECTAO75443 2155 aa19.02■□□□□ 0.64
CPNE1-208ENST00000414711 IRS1P35568 1242 aa19.02■□□□□ 0.64
CPNE1-208ENST00000414711 CNTN2Q02246 1040 aa19.02■□□□□ 0.64
CPNE1-208ENST00000414711 RETREG2Q8NC44 543 aa19.02■□□□□ 0.64
CPNE1-208ENST00000414711 KANSL2Q9H9L4 492 aa19.02■□□□□ 0.64
CPNE1-208ENST00000414711 TLR7Q9NYK1 1049 aaKnown RBP19.02■□□□□ 0.64
CPNE1-208ENST00000414711 MUTYHQ9UIF7 546 aa19.02■□□□□ 0.64
CPNE1-208ENST00000414711 CTDP1Q9Y5B0 961 aaPredicted RBP19.02■□□□□ 0.64
CPNE1-208ENST00000414711 TRIOO75962 3097 aa19.01■□□□□ 0.63
CPNE1-208ENST00000414711 LINC01553A4QN01 128 aa19.01■□□□□ 0.63
CPNE1-208ENST00000414711 TCF15Q12870 199 aa19.01■□□□□ 0.63
CPNE1-208ENST00000414711 OS9Q13438 667 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-208ENST00000414711 CHST13Q8NET6 341 aa19.01■□□□□ 0.63
CPNE1-208ENST00000414711 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
CPNE1-208ENST00000414711 Q9Y3F1 56 aa19.01■□□□□ 0.63
CPNE1-208ENST00000414711 TET1Q8NFU7 2136 aa19.01■□□□□ 0.63
CPNE1-208ENST00000414711 CACNA1HO95180 2353 aa19■□□□□ 0.63
CPNE1-208ENST00000414711 ZBED4O75132 1171 aa19■□□□□ 0.63
CPNE1-208ENST00000414711 DEFB103AP81534 67 aa19■□□□□ 0.63
CPNE1-208ENST00000414711 HERC4Q5GLZ8 1057 aaPredicted RBP19■□□□□ 0.63
CPNE1-208ENST00000414711 FAM133AQ8N9E0 248 aa19■□□□□ 0.63
CPNE1-208ENST00000414711 PRPF38AQ8NAV1 312 aaKnown RBP19■□□□□ 0.63
CPNE1-208ENST00000414711 FAM86C1Q9NVL1 165 aa19■□□□□ 0.63
CPNE1-208ENST00000414711 C5orf42Q9H799 3197 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 ASB14A6NK59 587 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 E9PSI1 815 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 CDK8P49336 464 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 FAM47CQ5HY64 1035 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 FBXO16Q8IX29 292 aaPredicted RBP18.99■□□□□ 0.63
CPNE1-208ENST00000414711 RAD9AQ99638 391 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 PDGFCQ9NRA1 345 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 HOMER2Q9NSB8 354 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 POLR3EQ9NVU0 708 aa18.99■□□□□ 0.63
CPNE1-208ENST00000414711 GJB5O95377 273 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 GNAI2P04899 355 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 PURAQ00577 322 aaKnown RBP18.98■□□□□ 0.63
CPNE1-208ENST00000414711 BFSP2Q13515 415 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 TIGD5Q53EQ6 642 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 TMEM63BQ5T3F8 832 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 IQSEC1Q6DN90 963 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 EP400NLQ6ZTU2 488 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 BMP8AQ7Z5Y6 402 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 LCORLQ8N3X6 602 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 FBXO22Q8NEZ5 403 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 PABPC5Q96DU9 382 aaKnown RBP18.98■□□□□ 0.63
CPNE1-208ENST00000414711 MRPL38Q96DV4 380 aaKnown RBP18.98■□□□□ 0.63
CPNE1-208ENST00000414711 CRBNQ96SW2 442 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 SLC38A10Q9HBR0 1119 aa18.98■□□□□ 0.63
CPNE1-208ENST00000414711 DDX49Q9Y6V7 483 aaKnown RBP18.98■□□□□ 0.63
CPNE1-208ENST00000414711 SOWAHBA6NEL2 793 aa18.97■□□□□ 0.63
CPNE1-208ENST00000414711 ANP32CO43423 234 aa18.97■□□□□ 0.63
CPNE1-208ENST00000414711 PKN1Q16512 942 aa18.97■□□□□ 0.63
CPNE1-208ENST00000414711 EEPD1Q7L9B9 569 aa18.97■□□□□ 0.63
CPNE1-208ENST00000414711 KIFC2Q96AC6 838 aa18.97■□□□□ 0.63
CPNE1-208ENST00000414711 POP1Q99575 1024 aaKnown RBP18.97■□□□□ 0.63
CPNE1-208ENST00000414711 CTNNA3Q9UI47 895 aa18.97■□□□□ 0.63
CPNE1-208ENST00000414711 PTPRZ1P23471 2315 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-208ENST00000414711 NDUFB10O96000 172 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 MYL3P08590 195 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 PDE6AP16499 860 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 OAZ1P54368 228 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 PTPROQ16827 1216 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 LRRFIP1Q32MZ4 808 aaKnown RBP18.96■□□□□ 0.63
CPNE1-208ENST00000414711 TAPT1Q6NXT6 567 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 C16orf86Q6ZW13 317 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 SUGP1Q8IWZ8 645 aaKnown RBP18.96■□□□□ 0.63
CPNE1-208ENST00000414711 EDAQ92838 391 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 PBXIP1Q96AQ6 731 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 C17orf80Q9BSJ5 609 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 MTG1Q9BT17 334 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-208ENST00000414711 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-208ENST00000414711 ACAD9Q9H845 621 aa18.96■□□□□ 0.63
CPNE1-208ENST00000414711 A1CFQ9NQ94 594 aaKnown RBP18.96■□□□□ 0.63
CPNE1-208ENST00000414711 CYP2D7A0A087X1C5 515 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 TMEM221A6NGB7 291 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 USP17L12C9JPN9 530 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 USP17L21D6R901 530 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 M0R296 226 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 COL19A1Q14993 1142 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 NBPF20Q3BBV1 942 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 ERMP1Q7Z2K6 904 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 RNF135Q8IUD6 432 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms