RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ANKLE1Q8NAG6 615 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 KCNB2Q92953 911 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 JMJD4Q9H9V9 463 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 SYNGAP1Q96PV0 1343 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 COL11A1P12107 1806 aaPredicted RBP17.09■□□□□ 0.33
CHD1-202ENST00000414220 ZNF236Q9UL36 1845 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 ZBTB5O15062 677 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 CCND3P30281 292 aaPredicted RBP17.08■□□□□ 0.32
CHD1-202ENST00000414220 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
CHD1-202ENST00000414220 QRICH1Q2TAL8 776 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 RGS22Q8NE09 1264 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 USP26Q9BXU7 913 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 CPVLQ9H3G5 476 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.32
CHD1-202ENST00000414220 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.32
CHD1-202ENST00000414220 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 SEPT4O43236 478 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 CYBAP13498 195 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 HOMER1Q86YM7 354 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
CHD1-202ENST00000414220 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 CRISPLD2Q9H0B8 497 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 RIOX1Q9H6W3 641 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 RBM28Q9NW13 759 aaKnown RBP17.07■□□□□ 0.32
CHD1-202ENST00000414220 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
CHD1-202ENST00000414220 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
CHD1-202ENST00000414220 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
CHD1-202ENST00000414220 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
CHD1-202ENST00000414220 BAATQ14032 418 aaPredicted RBP17.06■□□□□ 0.32
CHD1-202ENST00000414220 PPP2R5BQ15173 497 aa17.06■□□□□ 0.32
CHD1-202ENST00000414220 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
CHD1-202ENST00000414220 SAMD3Q8N6K7 520 aa17.06■□□□□ 0.32
CHD1-202ENST00000414220 FAM133AQ8N9E0 248 aa17.06■□□□□ 0.32
CHD1-202ENST00000414220 FANCBQ8NB91 859 aa17.06■□□□□ 0.32
CHD1-202ENST00000414220 HTATIP2Q9BUP3 242 aa17.06■□□□□ 0.32
CHD1-202ENST00000414220 ABHD16BQ9H3Z7 469 aa17.06■□□□□ 0.32
CHD1-202ENST00000414220 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
CHD1-202ENST00000414220 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 NFIBO00712 420 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 ZBTB43O43298 467 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 IGHA2P01877 340 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 AKR1A1P14550 325 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
CHD1-202ENST00000414220 CALML3P27482 149 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 NECAB2Q7Z6G3 386 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 ARRDC4Q8NCT1 418 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
CHD1-202ENST00000414220 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.05■□□□□ 0.32
CHD1-202ENST00000414220 MAP3K20Q9NYL2 800 aaKnown RBP17.05■□□□□ 0.32
CHD1-202ENST00000414220 ZHX1Q9UKY1 873 aaPredicted RBP17.05■□□□□ 0.32
CHD1-202ENST00000414220 OGDHLQ9ULD0 1010 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 FAM184BQ9ULE4 1060 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 PCDHA1Q9Y5I3 950 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 CYP46A1Q9Y6A2 500 aa17.05■□□□□ 0.32
CHD1-202ENST00000414220 RARBP10826 455 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 RCAN1P53805 252 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 PRAMEF19Q5SWL8 479 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 Q6ZUG5 572 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 ARMCX2Q7L311 632 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 CLEC4DQ8WXI8 215 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 PIGSQ96S52 555 aa17.04■□□□□ 0.32
CHD1-202ENST00000414220 KIAA0100Q14667 2235 aaKnown RBP17.04■□□□□ 0.32
CHD1-202ENST00000414220 KLF18A0A0U1RQI7 1052 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 RPS6KB1P23443 525 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
CHD1-202ENST00000414220 CNTN2Q02246 1040 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 ACVR2BQ13705 512 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 RTN1Q16799 776 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 APOA5Q6Q788 366 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 CCDC144CPQ8IYA2 1237 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 DNERQ8NFT8 737 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 TM6SF1Q9BZW5 370 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 HTTP42858 3142 aa17.03■□□□□ 0.32
CHD1-202ENST00000414220 RBBP6Q7Z6E9 1792 aaKnown RBP17.02■□□□□ 0.32
CHD1-202ENST00000414220 SOWAHBA6NEL2 793 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 SNAI1O95863 264 aaPredicted RBP17.02■□□□□ 0.32
CHD1-202ENST00000414220 ANAPC15P60006 121 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 LHX8Q68G74 356 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 FBXL16Q8N461 479 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 TRPV1Q8NER1 839 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 SPC25Q9HBM1 224 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.32
CHD1-202ENST00000414220 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
CHD1-202ENST00000414220 CFBP00751 764 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms