RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 MMP19Q99542 508 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 ZSWIM5Q9P217 1185 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 OGDHLQ9ULD0 1010 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 PRR12Q9ULL5 1215 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 ISY1Q9ULR0 285 aaKnown RBP10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 FRMPD2Q68DX3 1309 aaPredicted RBP10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 DNAJC25-GNG10A0A024R161 153 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 ZBED4O75132 1171 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 TFRCP02786 760 aaKnown RBP10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 PDHBP11177 359 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 IMMTQ16891 758 aaKnown RBP10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 CCDC96Q2M329 555 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 PRAMEF19Q5SWL8 479 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 BTNL9Q6UXG8 535 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 DPP9Q86TI2 863 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 FAM160B2Q86V87 743 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 ENAHQ8N8S7 591 aaPredicted RBP10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 DCAF4Q8WV16 495 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 ESR2Q92731 530 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 PAWRQ96IZ0 340 aaKnown RBP10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 CPVLQ9H3G5 476 aa10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 RNF41Q9H4P4 317 aaPredicted RBP10.05□□□□□ -0.8
HERPUD2-203ENST00000413517 TTLL13PA6NNM8 815 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 RBM25P49756 843 aaKnown RBP10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 ZNF543Q08ER8 600 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 SEC23AQ15436 765 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 MUM1L1Q5H9M0 696 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 FOXD4L5Q5VV16 416 aaPredicted RBP10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 MFSD14CQ5VZR4 134 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 ANO1Q5XXA6 986 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 CCDC174Q6PII3 467 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 CHURC1Q8WUH1 139 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 RUFY2Q8WXA3 655 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 FOXD4L4Q8WXT5 416 aaPredicted RBP10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 ANKS1AQ92625 1134 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 MAP4K1Q92918 833 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 ESYT1Q9BSJ8 1104 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 LSG1Q9H089 658 aaKnown RBP10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 HOMER2Q9NSB8 354 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 CTNNA3Q9UI47 895 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 ASTN1O14525 1302 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 PFASO15067 1338 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 TNKSO95271 1327 aa10.04□□□□□ -0.8
HERPUD2-203ENST00000413517 RANBP2P49792 3224 aaKnown RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 GOLGA8HP0CJ92 632 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 COPB2P35606 906 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 RFC5P40937 340 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 OAZ1P54368 228 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 ANTXR2P58335 489 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 CNTN2Q02246 1040 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 IKQ13123 557 aaPredicted RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 KCTD2Q14681 263 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 SLC35G1Q2M3R5 365 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 BMP2KLQ5H9B9 411 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 SYDE2Q5VT97 1194 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 DGKHQ86XP1 1220 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 PNMA1Q8ND90 353 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 TTC14Q96N46 770 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 ZSCAN10Q96SZ4 725 aaPredicted RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 RANBP17Q9H2T7 1088 aaKnown RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 A1CFQ9NQ94 594 aaKnown RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 RNF146Q9NTX7 359 aa10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 RBM8AQ9Y5S9 174 aaKnown RBP10.03□□□□□ -0.8
HERPUD2-203ENST00000413517 KIAA1217Q5T5P2 1943 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 E7EWF7 191 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 H0YGN5 161 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 ADCY6O43306 1168 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 SNAI1O95863 264 aaPredicted RBP10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 ZNF865P0CJ78 1059 aaPredicted RBP10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 FDX1P10109 184 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 COL6A1P12109 1028 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 ALAS1P13196 640 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 CNGA1P29973 690 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 MB21D2Q8IYB1 491 aaPredicted RBP10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 FAM133AQ8N9E0 248 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 CHST13Q8NET6 341 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 CCDC136Q96JN2 1154 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 PURBQ96QR8 312 aaKnown RBP10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 TINF2Q9BSI4 451 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 KRT23Q9C075 422 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 DDX20Q9UHI6 824 aaKnown RBP10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 DIS3Q9Y2L1 958 aaKnown RBP10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 LTBP2Q14767 1821 aa10.02□□□□□ -0.81
HERPUD2-203ENST00000413517 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms