RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 PSAPL1Q6NUJ1 521 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 DDX46Q7L014 1031 aaKnown RBP7.37□□□□□ -1.23
NOD1-203ENST00000413433 FCHSD1Q86WN1 690 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 SCUBE1Q8IWY4 988 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 AHI1Q8N157 1196 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 AFAP1L2Q8N4X5 818 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 FAM13CQ8NE31 585 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 APBA2Q99767 749 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 ARHGEF4Q9NR80 690 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 SFMBT1Q9UHJ3 866 aa7.37□□□□□ -1.23
NOD1-203ENST00000413433 SHPRHQ149N8 1683 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 DYRK3O43781 588 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 ECEL1O95672 775 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 POLR2BP30876 1174 aaKnown RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 RHBDL3P58872 404 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 SUMO1P63165 101 aaKnown RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 NFE2Q16621 373 aaPredicted RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 HP1BP3Q5SSJ5 553 aaPredicted RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 HEATR6Q6AI08 1181 aaKnown RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 SMC5Q8IY18 1101 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 LEO1Q8WVC0 666 aaPredicted RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 AVENQ9NQS1 362 aaPredicted RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 TRPC5Q9UL62 973 aaPredicted RBP7.36□□□□□ -1.23
NOD1-203ENST00000413433 CSADQ9Y600 493 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 CLTCL1P53675 1640 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 NEXMIFQ5QGS0 1516 aa7.36□□□□□ -1.23
NOD1-203ENST00000413433 XRN1Q8IZH2 1706 aaKnown RBP7.35□□□□□ -1.23
NOD1-203ENST00000413433 RPGRIP1LQ68CZ1 1315 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 CHURC1-FNTBB4DL54 471 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 KATNA1O75449 491 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 RGS9O75916 674 aaPredicted RBP7.35□□□□□ -1.23
NOD1-203ENST00000413433 TP53P04637 393 aaPredicted RBP7.35□□□□□ -1.23
NOD1-203ENST00000413433 ADH6P28332 368 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 PMS1P54277 932 aaKnown RBP7.35□□□□□ -1.23
NOD1-203ENST00000413433 PPP2R2AP63151 447 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 STRN3Q13033 797 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
NOD1-203ENST00000413433 YOD1Q5VVQ6 348 aaPredicted RBP7.35□□□□□ -1.23
NOD1-203ENST00000413433 TDRD10Q5VZ19 366 aaKnown RBP7.35□□□□□ -1.23
NOD1-203ENST00000413433 TXNDC11Q6PKC3 985 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 CYFIP1Q7L576 1253 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 WNT8BQ93098 351 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 TRIM11Q96F44 468 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 SLC6A18Q96N87 628 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 CLUHP3Q96NS8 147 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 SMAD5Q99717 465 aaKnown RBP7.35□□□□□ -1.23
NOD1-203ENST00000413433 PLVAPQ9BX97 442 aa7.35□□□□□ -1.23
NOD1-203ENST00000413433 PLEKHH1Q9ULM0 1364 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 SPDYE3A6NKU9 549 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 CAND2O75155 1236 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 KRT18P05783 430 aaKnown RBP7.34□□□□□ -1.23
NOD1-203ENST00000413433 LIG1P18858 919 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 OS9Q13438 667 aaPredicted RBP7.34□□□□□ -1.23
NOD1-203ENST00000413433 NECAB2Q7Z6G3 386 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 IL22RA1Q8N6P7 574 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 LRRN4CLQ8ND94 238 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 ACSF2Q96CM8 615 aaPredicted RBP7.34□□□□□ -1.23
NOD1-203ENST00000413433 MTMR8Q96EF0 704 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 RPS6KC1Q96S38 1066 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 USP26Q9BXU7 913 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 TPSG1Q9NRR2 321 aa7.34□□□□□ -1.23
NOD1-203ENST00000413433 CDK12Q9NYV4 1490 aaPredicted RBP7.34□□□□□ -1.23
NOD1-203ENST00000413433 NPHP3Q7Z494 1330 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 SPHKAPQ2M3C7 1700 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 ZNF862O60290 1169 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 SCGB1D2O95969 90 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 EPHX1P07099 455 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 SLFN14P0C7P3 912 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 SDSP20132 328 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 GBP1P32455 592 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 GNALP38405 381 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 NEK4P51957 841 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 ITKQ08881 620 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 KRT28Q7Z3Y7 464 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 WDR66Q8TBY9 1149 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 NUDT8Q8WV74 236 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 TTC9Q92623 222 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 SMARCC1Q92922 1105 aaPredicted RBP7.33□□□□□ -1.24
NOD1-203ENST00000413433 MPHOSPH9Q99550 1183 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 HAUS7Q99871 368 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 GBP3Q9H0R5 595 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 GOLGA2P5Q9HBQ8 144 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 OSGEPQ9NPF4 335 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 SLC5A4Q9NY91 659 aa7.33□□□□□ -1.24
NOD1-203ENST00000413433 SUCOQ9UBS9 1254 aaKnown RBP7.33□□□□□ -1.24
NOD1-203ENST00000413433 RRBP1Q9P2E9 1410 aaKnown RBP7.33□□□□□ -1.24
NOD1-203ENST00000413433 NALCNQ8IZF0 1738 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 NHSL1Q5SYE7 1610 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 SHTN1A0MZ66 631 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 LINC01387J3KSC0 135 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 PRODHO43272 600 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 CLEC3AO75596 197 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 APBA3O96018 575 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 APPP05067 770 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 FGFR1P11362 822 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 NEK2P51955 445 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 MCL1Q07820 350 aa7.32□□□□□ -1.24
NOD1-203ENST00000413433 KIF4BQ2VIQ3 1234 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms