RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 RILPL2Q969X0 211 aa22.7■■□□□ 1.22
CPSF7-204ENST00000413232 TOX2Q96NM4 488 aa22.7■■□□□ 1.22
CPSF7-204ENST00000413232 CYP39A1Q9NYL5 469 aa22.7■■□□□ 1.22
CPSF7-204ENST00000413232 FRMPD2Q68DX3 1309 aaPredicted RBP22.69■■□□□ 1.22
CPSF7-204ENST00000413232 CCDC171Q6TFL3 1326 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 RAG1P15918 1043 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 BEX3Q00994 111 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 GNASQ5JWF2 1037 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 BTNL9Q6UXG8 535 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 TBC1D10CQ8IV04 446 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 DCAF4Q8WV16 495 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 RANBP17Q9H2T7 1088 aaKnown RBP22.69■■□□□ 1.22
CPSF7-204ENST00000413232 PDGFCQ9NRA1 345 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 TCP11L1Q9NUJ3 509 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 CCPG1Q9ULG6 757 aa22.69■■□□□ 1.22
CPSF7-204ENST00000413232 ELP1O95163 1332 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 ZMYM6O95789 1325 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 PRUNE2Q8WUY3 3088 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 TOP1P11387 765 aaKnown RBP22.68■■□□□ 1.22
CPSF7-204ENST00000413232 NKX3-2P78367 333 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 GLT1D1Q96MS3 346 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 GPCPD1Q9NPB8 672 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 TBX21Q9UL17 535 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 GNEQ9Y223 722 aaKnown RBP22.68■■□□□ 1.22
CPSF7-204ENST00000413232 LAMA4Q16363 1823 aa22.68■■□□□ 1.22
CPSF7-204ENST00000413232 ICAM1P05362 532 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 SDSP20132 328 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 TNFAIP2Q03169 654 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 TAPT1Q6NXT6 567 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 NSMFQ6X4W1 530 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 EEPD1Q7L9B9 569 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 CHD1LQ86WJ1 897 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 TICAM2Q86XR7 235 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 PCSK9Q8NBP7 692 aaKnown RBP22.67■■□□□ 1.22
CPSF7-204ENST00000413232 EXOC6Q8TAG9 804 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 MYO9BQ13459 2157 aa22.67■■□□□ 1.22
CPSF7-204ENST00000413232 ASB14A6NK59 587 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 DCDC2CA8MYV0 355 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 PDHBP11177 359 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 SMPD1P17405 629 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 NUCB1Q02818 461 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 AKNAD1Q5T1N1 836 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 SYDE2Q5VT97 1194 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
CPSF7-204ENST00000413232 SPC25Q9HBM1 224 aa22.66■■□□□ 1.22
CPSF7-204ENST00000413232 NEDD4P46934 1319 aa22.65■■□□□ 1.22
CPSF7-204ENST00000413232 NFIBO00712 420 aa22.65■■□□□ 1.22
CPSF7-204ENST00000413232 BAATQ14032 418 aaPredicted RBP22.65■■□□□ 1.22
CPSF7-204ENST00000413232 FBXO16Q8IX29 292 aaPredicted RBP22.65■■□□□ 1.22
CPSF7-204ENST00000413232 VTI1AQ96AJ9 217 aa22.65■■□□□ 1.22
CPSF7-204ENST00000413232 TTYH1Q9H313 450 aaPredicted RBP22.65■■□□□ 1.22
CPSF7-204ENST00000413232 SEMA6BQ9H3T3 888 aa22.65■■□□□ 1.22
CPSF7-204ENST00000413232 OSBPL3Q9H4L5 887 aa22.65■■□□□ 1.22
CPSF7-204ENST00000413232 ARVCFO00192 962 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 DLL1O00548 723 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 TIMP1P01033 207 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 FPGSQ05932 587 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 AAMPQ13685 434 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 ZNF697Q5TEC3 545 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 CXCL17Q6UXB2 119 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 MFSD6Q6ZSS7 791 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 NOL8Q76FK4 1167 aaKnown RBP22.64■■□□□ 1.21
CPSF7-204ENST00000413232 FAM126BQ8IXS8 530 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 ZKSCAN3Q9BRR0 538 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 CUL9Q8IWT3 2517 aa22.64■■□□□ 1.21
CPSF7-204ENST00000413232 GRIN2DO15399 1336 aa22.63■■□□□ 1.21
CPSF7-204ENST00000413232 MYH6P13533 1939 aa22.63■■□□□ 1.21
CPSF7-204ENST00000413232 A0A0U1RQG5 324 aaPredicted RBP22.63■■□□□ 1.21
CPSF7-204ENST00000413232 SMAD3P84022 425 aaKnown RBP22.63■■□□□ 1.21
CPSF7-204ENST00000413232 ZNF543Q08ER8 600 aa22.63■■□□□ 1.21
CPSF7-204ENST00000413232 C16orf59Q7L2K0 433 aa22.63■■□□□ 1.21
CPSF7-204ENST00000413232 TLK2Q86UE8 772 aa22.63■■□□□ 1.21
CPSF7-204ENST00000413232 MORC4Q8TE76 937 aa22.63■■□□□ 1.21
CPSF7-204ENST00000413232 CLEC4DQ8WXI8 215 aa22.63■■□□□ 1.21
CPSF7-204ENST00000413232 RNPC3Q96LT9 517 aaKnown RBP22.63■■□□□ 1.21
CPSF7-204ENST00000413232 DYNC1LI2O43237 492 aaPredicted RBP22.62■■□□□ 1.21
CPSF7-204ENST00000413232 SNHG28P0DPA3 235 aa22.62■■□□□ 1.21
CPSF7-204ENST00000413232 CWC27Q6UX04 472 aaKnown RBP22.62■■□□□ 1.21
CPSF7-204ENST00000413232 TTC14Q96N46 770 aa22.62■■□□□ 1.21
CPSF7-204ENST00000413232 CDX2Q99626 313 aaPredicted RBP22.62■■□□□ 1.21
CPSF7-204ENST00000413232 CPVLQ9H3G5 476 aa22.62■■□□□ 1.21
CPSF7-204ENST00000413232 CD4P01730 458 aa22.61■■□□□ 1.21
CPSF7-204ENST00000413232 FSCN1Q16658 493 aaKnown RBP22.61■■□□□ 1.21
CPSF7-204ENST00000413232 IQSEC1Q6DN90 963 aa22.61■■□□□ 1.21
CPSF7-204ENST00000413232 MFSD5Q6N075 450 aa22.61■■□□□ 1.21
CPSF7-204ENST00000413232 SLC30A10Q6XR72 485 aa22.61■■□□□ 1.21
CPSF7-204ENST00000413232 SLC43A3Q8NBI5 491 aa22.61■■□□□ 1.21
CPSF7-204ENST00000413232 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.61■■□□□ 1.212e-7■■■■□ 22.5
CPSF7-204ENST00000413232 MROH7Q68CQ1 1323 aa22.6■■□□□ 1.21
CPSF7-204ENST00000413232 GOLGA8HP0CJ92 632 aa22.6■■□□□ 1.21
CPSF7-204ENST00000413232 ALDH5A1P51649 535 aaPredicted RBP22.6■■□□□ 1.21
CPSF7-204ENST00000413232 PPP1R12CQ9BZL4 782 aa22.6■■□□□ 1.21
CPSF7-204ENST00000413232 IL25Q9H293 177 aa22.6■■□□□ 1.21
CPSF7-204ENST00000413232 PTPDC1A2A3K4 754 aa22.59■■□□□ 1.21
CPSF7-204ENST00000413232 PCP11498 1178 aaKnown RBP22.59■■□□□ 1.21
CPSF7-204ENST00000413232 CSF2RAP15509 400 aa22.59■■□□□ 1.21
CPSF7-204ENST00000413232 KIAA1211Q6ZU35 1233 aa22.59■■□□□ 1.21
CPSF7-204ENST00000413232 VTA1Q9NP79 307 aa22.59■■□□□ 1.21
CPSF7-204ENST00000413232 ZNF213O14771 459 aa22.58■■□□□ 1.21
CPSF7-204ENST00000413232 PSMC6P62333 389 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms