RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 CCDC144CPQ8IYA2 1237 aa2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 NT5C1AQ9BXI3 368 aa2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 GZF1Q9H116 711 aaPredicted RBP2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 GP6Q9HCN6 339 aa2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 LUC7LQ9NQ29 371 aaKnown RBP2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 SPATA6Q9NWH7 488 aaPredicted RBP2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 PPT2Q9UMR5 302 aa2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 PCDHB10Q9UN67 800 aa2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 SIT1Q9Y3P8 196 aa2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 PCDHGB7Q9Y5F8 929 aa2.89□□□□□ -1.95
RNU2-55P-201ENST00000411146 ABLIM1O14639 778 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 CBFA2T2O43439 604 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 CD247P20963 164 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZNF165P49910 485 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 PMS1P54277 932 aaKnown RBP2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 HTRA3P83110 453 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 RAD51AP2Q09MP3 1159 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 PUM1Q14671 1186 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 PPP2R5DQ14738 602 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZNF394Q53GI3 561 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 BICRALQ6AI39 1079 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZC3H14Q6PJT7 736 aaKnown RBP2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 LIPIQ6XZB0 460 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 FRMD5Q7Z6J6 570 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 STK32CQ86UX6 486 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 CPNE8Q86YQ8 564 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 FIBCD1Q8N539 461 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 ADCY4Q8NFM4 1077 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 GIPC2Q8TF65 315 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZDHHC15Q96MV8 337 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 TEPSINQ96N21 525 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 DSCC1Q9BVC3 393 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 TMPRSS5Q9H3S3 457 aa2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 NOL6Q9H6R4 1146 aaKnown RBP2.88□□□□□ -1.95
RNU2-55P-201ENST00000411146 NOBOXO60393 691 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 GSNP06396 782 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 CD3EP07766 207 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 PMLP29590 882 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 CCNFP41002 786 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 RACK1P63244 317 aaKnown RBP2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 DPY19L1Q2PZI1 675 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZXDCQ2QGD7 858 aaPredicted RBP2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 ANKRD39Q53RE8 183 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 HLA-DQA1Q5Y7H0 255 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 DIEXFQ68CQ4 756 aaKnown RBP2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 INTS3Q68E01 1043 aaKnown RBP2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 PAQR3Q6TCH7 311 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 CCDC81Q6ZN84 652 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 HS2ST1Q7LGA3 356 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 SAPCD2Q86UD0 394 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 SP8Q8IXZ3 490 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 FAM26EQ8N5C1 309 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 NAT16Q8N8M0 369 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 FGD4Q96M96 766 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 PTCHD1Q96NR3 888 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 SPON2Q9BUD6 331 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 LGR4Q9BXB1 951 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 SRRTQ9BXP5 876 aaKnown RBP2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 PDLIM7Q9NR12 457 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZNRF3Q9ULT6 936 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 RWDD3Q9Y3V2 267 aa2.87□□□□□ -1.95
RNU2-55P-201ENST00000411146 A0A1W2PQ27 194 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 A0A1W2PQ64 194 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 A0A1W2PQC6 194 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 A0A1W2PQD8 194 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 ARNTLO00327 626 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 CYBBP04839 570 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 GLI4P10075 376 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 CNR2P34972 360 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 SMAD4Q13485 552 aaKnown RBP2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 NR1I3Q14994 352 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 NOL9Q5SY16 702 aaKnown RBP2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 UBXN11Q5T124 520 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 FBXW10Q5XX13 1052 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 MBLAC2Q68D91 279 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 JAMLQ86YT9 394 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 TMEM87AQ8NBN3 555 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 DDX11Q96FC9 970 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 RBM15Q96T37 977 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 MTA3Q9BTC8 594 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 BCL2L13Q9BXK5 485 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 KRTAP3-1Q9BYR8 98 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 BACH2Q9BYV9 841 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 GULP1Q9UBP9 304 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 PMF1-BGLAPU3KQ54 211 aa2.86□□□□□ -1.95
RNU2-55P-201ENST00000411146 STXBP3O00186 592 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 SRGAP3O43295 1099 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 CAP1Q01518 475 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 LRRFIP1Q32MZ4 808 aaKnown RBP2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 SPATS1Q496A3 300 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZFYVE27Q5T4F4 411 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 OLFML2BQ68BL8 750 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 CWF19L1Q69YN2 538 aaKnown RBP2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 KIAA0825Q8IV33 1275 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 CARFQ8N187 725 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 ZNF513Q8N8E2 541 aaPredicted RBP2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 NLGN2Q8NFZ4 835 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 SMARCC2Q8TAQ2 1214 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 DPF3Q92784 378 aa2.85□□□□□ -1.95
RNU2-55P-201ENST00000411146 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms