RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 GPCPD1Q9NPB8 672 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.25■□□□□ 0.19
MINDY4-202ENST00000409881 MAD2L2Q9UI95 211 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 SPDYE5A6NIY4 337 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 POLR3GO15318 223 aaPredicted RBP16.24■□□□□ 0.19
MINDY4-202ENST00000409881 SNHG28P0DPA3 235 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 SLC20A2Q08357 652 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 CPLX2Q6PUV4 134 aaKnown RBP16.24■□□□□ 0.19
MINDY4-202ENST00000409881 CCAR1Q8IX12 1150 aaKnown RBP16.24■□□□□ 0.19
MINDY4-202ENST00000409881 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 PPP1R13BQ96KQ4 1090 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
MINDY4-202ENST00000409881 L2HGDHQ9H9P8 463 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 TRPM7Q96QT4 1865 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 H3BQV1 296 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 KIF2AO00139 706 aaPredicted RBP16.24■□□□□ 0.19
MINDY4-202ENST00000409881 CTDNEP1O95476 244 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 FOSBP53539 338 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 BACE1P56817 501 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 ZNF543Q08ER8 600 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 IFFO2Q5TF58 517 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 NSUN7Q8NE18 718 aaKnown RBP16.24■□□□□ 0.19
MINDY4-202ENST00000409881 OPTNQ96CV9 577 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
MINDY4-202ENST00000409881 PTPDC1A2A3K4 754 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
MINDY4-202ENST00000409881 HUNKP57058 714 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 PPATQ06203 517 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 ASPRV1Q53RT3 343 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 PHKBQ93100 1093 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 CPVLQ9H3G5 476 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 PHIPQ8WWQ0 1821 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 KLRF2D3W0D1 207 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 CDKL5O76039 1030 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 USP14P54578 494 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 HMGCS2P54868 508 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 NBPF11Q86T75 865 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 NEK11Q8NG66 645 aa16.23■□□□□ 0.19
MINDY4-202ENST00000409881 IRF6O14896 467 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 BMP3P12645 472 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 GNAQP50148 359 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 NTRK3Q16288 839 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 SRBD1Q8N5C6 995 aaKnown RBP16.22■□□□□ 0.19
MINDY4-202ENST00000409881 LLPHQ9BRT6 129 aaKnown RBP16.22■□□□□ 0.19
MINDY4-202ENST00000409881 KCND1Q9NSA2 647 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 EMILIN3Q9NT22 766 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.22■□□□□ 0.19
MINDY4-202ENST00000409881 UNCXA6NJT0 531 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 RAD51AP2Q09MP3 1159 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 IKQ13123 557 aaPredicted RBP16.22■□□□□ 0.19
MINDY4-202ENST00000409881 PPIL2Q13356 520 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 GPATCH4Q5T3I0 446 aaKnown RBP16.22■□□□□ 0.19
MINDY4-202ENST00000409881 TTBK2Q6IQ55 1244 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 SLC26A6Q9BXS9 759 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 CFAP45Q9UL16 551 aa16.22■□□□□ 0.19
MINDY4-202ENST00000409881 IFNAR1P17181 557 aa16.21■□□□□ 0.19
MINDY4-202ENST00000409881 SLC16A2P36021 539 aa16.21■□□□□ 0.19
MINDY4-202ENST00000409881 GSDMDP57764 484 aa16.21■□□□□ 0.19
MINDY4-202ENST00000409881 LPAR1Q92633 364 aa16.21■□□□□ 0.19
MINDY4-202ENST00000409881 TMOD4Q9NZQ9 345 aa16.21■□□□□ 0.19
MINDY4-202ENST00000409881 C19orf81C9J6K1 198 aa16.21■□□□□ 0.18
MINDY4-202ENST00000409881 CTAGE5O15320 804 aa16.21■□□□□ 0.18
MINDY4-202ENST00000409881 FSTL1Q12841 308 aa16.21■□□□□ 0.18
MINDY4-202ENST00000409881 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.18
MINDY4-202ENST00000409881 ANO10Q9NW15 660 aa16.21■□□□□ 0.18
MINDY4-202ENST00000409881 FEZ2Q9UHY8 353 aaPredicted RBP16.21■□□□□ 0.18
MINDY4-202ENST00000409881 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 TMEM232C9JQI7 657 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 VCAM1P19320 739 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 GJA5P36382 358 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
MINDY4-202ENST00000409881 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
MINDY4-202ENST00000409881 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 LZTS2Q9BRK4 669 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 ORC3Q9UBD5 711 aaPredicted RBP16.2■□□□□ 0.18
MINDY4-202ENST00000409881 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
MINDY4-202ENST00000409881 SEC31AO94979 1220 aaKnown RBP16.2■□□□□ 0.18
MINDY4-202ENST00000409881 FUT2Q10981 343 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 SLC35G1Q2M3R5 365 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 ARMCX5Q6P1M9 558 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 CCDC73Q6ZRK6 1079 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 TMC6Q7Z403 805 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 CEP57L1Q8IYX8 460 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 TANGO6Q9C0B7 1094 aa16.2■□□□□ 0.18
MINDY4-202ENST00000409881 ABT1Q9ULW3 272 aaKnown RBP16.2■□□□□ 0.18
MINDY4-202ENST00000409881 WDR46O15213 610 aaKnown RBP16.19■□□□□ 0.18
MINDY4-202ENST00000409881 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
MINDY4-202ENST00000409881 SMC2O95347 1197 aa16.19■□□□□ 0.18
MINDY4-202ENST00000409881 AKAP17AQ02040 695 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms