RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HMGN5P82970 282 aaKnown RBP16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 C17orf99Q6UX52 265 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 MB21D1Q8N884 522 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 RNF146Q9NTX7 359 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 BARHL2Q9NY43 387 aa16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
CHRNA1-204ENST00000409323 DOCK3Q8IZD9 2030 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 OPLAHO14841 1288 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 FDX1P10109 184 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 CAP1Q01518 475 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 FAM110CQ1W6H9 321 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 NSMFQ6X4W1 530 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 RIOX2Q8IUF8 465 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 CLEC4DQ8WXI8 215 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 INTS4Q96HW7 963 aaKnown RBP16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 ARHGAP39Q9C0H5 1083 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 MORF4L1Q9UBU8 362 aa16.25■□□□□ 0.19
CHRNA1-204ENST00000409323 ATP2A1O14983 1001 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 CFBP00751 764 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 CTGFP29279 349 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 OAZ1P54368 228 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 UBE2SQ16763 222 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 FOXD4L5Q5VV16 416 aaPredicted RBP16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 CCAR1Q8IX12 1150 aaKnown RBP16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 GTF3C2Q8WUA4 911 aaPredicted RBP16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 FOXD4L4Q8WXT5 416 aaPredicted RBP16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 C8orf76Q96K31 380 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 BEGAINQ9BUH8 593 aa16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 RBM27Q9P2N5 1060 aaKnown RBP16.24■□□□□ 0.19
CHRNA1-204ENST00000409323 PLXNB2O15031 1838 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 SMCO2A6NFE2 343 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 NLRP5P59047 1200 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 LARP1BQ659C4 914 aaKnown RBP16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 KRT40Q6A162 431 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 USP17L6PQ6QN14 398 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 WASF1Q92558 559 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 PGBD1Q96JS3 809 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 ABCB11O95342 1321 aa16.23■□□□□ 0.19
CHRNA1-204ENST00000409323 PKP1Q13835 747 aa16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 OXER1Q8TDS5 423 aa16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 ACAD9Q9H845 621 aa16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 WBP1LQ9NX94 342 aa16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 MGAMO43451 1857 aa16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 ZNFX1Q9P2E3 1918 aaKnown RBP16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 RBBP6Q7Z6E9 1792 aaKnown RBP16.22■□□□□ 0.19
CHRNA1-204ENST00000409323 VPS37CA5D8V6 355 aaPredicted RBP16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 CALML3P27482 149 aa16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 CCNA1P78396 465 aa16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 FCHSD1Q86WN1 690 aa16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 PSTPIP2Q9H939 334 aa16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 BIN2Q9UBW5 565 aaPredicted RBP16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 DDX49Q9Y6V7 483 aaKnown RBP16.21■□□□□ 0.19
CHRNA1-204ENST00000409323 H3BQV1 296 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 GPR25O00155 361 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 PGK2P07205 417 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 SYT1P21579 422 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 ADCY7P51828 1080 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 TRIM29Q14134 588 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 NPY5RQ15761 445 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 IFFO2Q5TF58 517 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 JAKMIP3Q5VZ66 844 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 GPR142Q7Z601 462 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 CD99L2Q8TCZ2 262 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 PHF20Q9BVI0 1012 aa16.21■□□□□ 0.18
CHRNA1-204ENST00000409323 LCTP09848 1927 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 SLC25A27O95847 323 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 XBP1P17861 261 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 LACTBP83111 547 aaPredicted RBP16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 SP3Q02447 781 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 NR5A1Q13285 461 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 MCTP1Q6DN14 999 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 CHST13Q8NET6 341 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 CCDC148Q8NFR7 591 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 MMP19Q99542 508 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 COL20A1Q9P218 1284 aa16.2■□□□□ 0.18
CHRNA1-204ENST00000409323 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 hCG_1984214I3L0E3 225 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 MEIS2O14770 477 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 MMP1P03956 469 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 PSMC4P43686 418 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 UBXN2AP68543 259 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 CNTN2Q02246 1040 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 TKFCQ3LXA3 575 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms