RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 ZNF174Q15697 407 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 SHROOM1Q2M3G4 852 aaPredicted RBP11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 FAM83BQ5T0W9 1011 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 DTHD1Q6ZMT9 781 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 MYPNQ86TC9 1320 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 C4orf32Q8N8J7 132 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 WRNIP1Q96S55 665 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 FUCA2Q9BTY2 467 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 RAB34Q9BZG1 259 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 GOLPH3LQ9H4A5 285 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 PPP1R11O60927 126 aaPredicted RBP11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 USP2O75604 605 aaPredicted RBP11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 INPP5BP32019 993 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 MCM7P33993 719 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 PDIA5Q14554 519 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 ZRSR1Q15695 479 aaKnown RBP11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 INF2Q27J81 1249 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 RASGRP2Q7LDG7 609 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 TBCKQ8TEA7 893 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 BIN2Q9UBW5 565 aaPredicted RBP11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
SNORD88C-201ENST00000408061 CYP3A7-CYP3A51PA0A087WV96 503 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 NEMFO60524 1076 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 ZBED4O75132 1171 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 ICAM1P05362 532 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 CYP3A7P24462 503 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 OAZ1P54368 228 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 GHRHRQ02643 423 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 CT47A1Q5JQC4 288 aaPredicted RBP11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 JAKMIP3Q5VZ66 844 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 KRT26Q7Z3Y9 468 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 SPICE1Q8N0Z3 855 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 IQUBQ8NA54 791 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 NUP88Q99567 741 aaPredicted RBP11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 CCSER1Q9C0I3 900 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 NAT10Q9H0A0 1025 aaKnown RBP11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 CSRNP2Q9H175 543 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 TMOD4Q9NZQ9 345 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 CSADQ9Y600 493 aa11.71□□□□□ -0.53
SNORD88C-201ENST00000408061 WDR90Q96KV7 1748 aa11.71□□□□□ -0.54
SNORD88C-201ENST00000408061 SPDYE3A6NKU9 549 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 MEIS2O14770 477 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 TBX3O15119 743 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 CCNT1O60563 726 aaKnown RBP11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 MYL1P05976 194 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 CYP3A4P08684 503 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 OR52Z1P0C646 297 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 SLFN14P0C7P3 912 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 TYRO3Q06418 890 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 SPP2Q13103 211 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 TMEM266Q2M3C6 531 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 LETM2Q2VYF4 491 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 KIAA1755Q5JYT7 1200 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 KRBA2Q6ZNG9 492 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 CNNM3Q8NE01 707 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 RASGRP4Q8TDF6 673 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 MBOAT7Q96N66 472 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 CLIC6Q96NY7 704 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 GTPBP4Q9BZE4 634 aaKnown RBP11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 PPP1R9AQ9ULJ8 1098 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 AFG3L2Q9Y4W6 797 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 PHIPQ8WWQ0 1821 aa11.7□□□□□ -0.54
SNORD88C-201ENST00000408061 VWA3AA6NCI4 1184 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 GCOM1H8Y6P7 765 aaPredicted RBP11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 CXCL11O14625 94 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 ATP2A1O14983 1001 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 POLR2MP0CAP2 368 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 CIITAP33076 1130 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 SREBF1P36956 1147 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 PPATQ06203 517 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 COG2Q14746 738 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 CAMK4Q16566 473 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 STX1AQ16623 288 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 TKFCQ3LXA3 575 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 ARMC9Q7Z3E5 817 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 SLFN12Q8IYM2 578 aa11.69□□□□□ -0.54
SNORD88C-201ENST00000408061 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms