RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 C12orf60Q5U649 245 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 CKAP2LQ8IYA6 745 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 CBX8Q9HC52 389 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 GPHNQ9NQX3 736 aaPredicted RBP14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 RBM28Q9NW13 759 aaKnown RBP14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 HERC5Q9UII4 1024 aaKnown RBP14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 SERPINB13Q9UIV8 391 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 PCDHA7Q9UN72 937 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 CEP131Q9UPN4 1083 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 AFG3L2Q9Y4W6 797 aa14.77□□□□□ -0.05
SMARCB1-203ENST00000407082 NEDD4P46934 1319 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 FAM196BA6NMK8 535 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 BECN2A8MW95 431 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 DTNBO60941 627 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 CDC25BP30305 580 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 MAP3K10Q02779 954 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 EVX2Q03828 476 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 CTDSPL2Q05D32 466 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 SLC39A14Q15043 492 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 KRT40Q6A162 431 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 METTL16Q86W50 562 aaKnown RBP14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 MICU3Q86XE3 530 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 IQCA1Q86XH1 822 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 CEP57L1Q8IYX8 460 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 ENGASEQ8NFI3 743 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 CCDC34Q96HJ3 373 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 EHD4Q9H223 541 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 NAV1Q8NEY1 1877 aa14.76□□□□□ -0.05
SMARCB1-203ENST00000407082 PHF20L1A8MW92 1017 aa14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 SMIM22K7EJ46 135 aa14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 CUTAO60888 179 aa14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.053e-8■□□□□ 9.3
SMARCB1-203ENST00000407082 RRP12Q5JTH9 1297 aaKnown RBP14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 CCDC84Q86UT8 332 aaPredicted RBP14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 STK11IPQ8N1F8 1099 aa14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 DYNLL2Q96FJ2 89 aa14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 SLC45A1Q9Y2W3 748 aa14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 DOCK3Q8IZD9 2030 aa14.75□□□□□ -0.05
SMARCB1-203ENST00000407082 SMTNL1A8MU46 457 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 NEMFO60524 1076 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 GABPAQ06546 454 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 SNW1Q13573 536 aaKnown RBP14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 NTRK3Q16288 839 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 SARM1Q6SZW1 724 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 CATIPQ7Z7H3 387 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 ELOA2Q8IYF1 753 aaPredicted RBP14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 FMR1NBQ8N0W7 255 aaPredicted RBP14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 BPIFA3Q9BQP9 254 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 SLC26A6Q9BXS9 759 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 RNF26Q9BY78 433 aaPredicted RBP14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 TRIM5Q9C035 493 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 FOXP1Q9H334 677 aaPredicted RBP14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 PNMA3Q9UL41 463 aa14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMARCB1-203ENST00000407082 DDX60LQ5H9U9 1706 aaKnown RBP14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 BMP15O95972 392 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 CYP2B6P20813 491 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 CDC27P30260 824 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 RILPL1Q5EBL4 403 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 C16orf86Q6ZW13 317 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 DRC7Q8IY82 874 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 ZNF654Q8IZM8 581 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 FANCBQ8NB91 859 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 PIBF1Q8WXW3 757 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 GUCD1Q96NT3 240 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 DNAJC18Q9H819 358 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 BRMS1Q9HCU9 246 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 AGTPBP1Q9UPW5 1226 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 CLIC4Q9Y696 253 aa14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 MORC2Q9Y6X9 1032 aaPredicted RBP14.73□□□□□ -0.05
SMARCB1-203ENST00000407082 ORC4O43929 436 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 CTNND1O60716 968 aaKnown RBP14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 DDAH1O94760 285 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 FGRP09769 529 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 SHMT1P34896 483 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 CDK8P49336 464 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 PDE4BQ07343 736 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 FAM110CQ1W6H9 321 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 CERKLQ49MI3 558 aaPredicted RBP14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 TATDN1Q6P1N9 297 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 SLC44A5Q8NCS7 719 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 LBHD1Q9BQE6 289 aaPredicted RBP14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 MKNK2Q9HBH9 465 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 PRDM6Q9NQX0 595 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 KIAA1468Q9P260 1216 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 OGDHLQ9ULD0 1010 aa14.72□□□□□ -0.05
SMARCB1-203ENST00000407082 SIPA1L1O43166 1804 aa14.71□□□□□ -0.05
SMARCB1-203ENST00000407082 MYH6P13533 1939 aa14.71□□□□□ -0.05
SMARCB1-203ENST00000407082 ZNF202O95125 648 aa14.71□□□□□ -0.05
SMARCB1-203ENST00000407082 MMP1P03956 469 aa14.71□□□□□ -0.05
SMARCB1-203ENST00000407082 ZNF75DP51815 510 aa14.71□□□□□ -0.05
SMARCB1-203ENST00000407082 IFIT1BQ5T764 474 aaKnown RBP14.71□□□□□ -0.05
SMARCB1-203ENST00000407082 ZNF697Q5TEC3 545 aa14.71□□□□□ -0.05
SMARCB1-203ENST00000407082 KANK3Q6NY19 840 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms