RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 EEPD1Q7L9B9 569 aa18.27■□□□□ 0.52
SYNGR1-205ENST00000406293 CHST13Q8NET6 341 aa18.27■□□□□ 0.52
SYNGR1-205ENST00000406293 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.27■□□□□ 0.52
SYNGR1-205ENST00000406293 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
SYNGR1-205ENST00000406293 RFC2P35250 354 aa18.26■□□□□ 0.51
SYNGR1-205ENST00000406293 ARHGAP45Q92619 1136 aa18.26■□□□□ 0.51
SYNGR1-205ENST00000406293 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
SYNGR1-205ENST00000406293 LMCD1Q9NZU5 365 aa18.26■□□□□ 0.51
SYNGR1-205ENST00000406293 ISY1Q9ULR0 285 aaKnown RBP18.26■□□□□ 0.51
SYNGR1-205ENST00000406293 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 MYL3P08590 195 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 AACSQ86V21 672 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 CRBNQ96SW2 442 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 TNNQ9UQP3 1299 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 COG6Q9Y2V7 657 aa18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 DDX49Q9Y6V7 483 aaKnown RBP18.25■□□□□ 0.51
SYNGR1-205ENST00000406293 SCN5AQ14524 2016 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 ASB14A6NK59 587 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 USP17L12C9JPN9 530 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 USP17L21D6R901 530 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 F5H6K3 240 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 ATP2A1O14983 1001 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 NDUFB10O96000 172 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 RARSP54136 660 aaKnown RBP18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 KLRC3Q07444 240 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 C12orf60Q5U649 245 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 EP400NLQ6ZTU2 488 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 C16orf86Q6ZW13 317 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 SSH3Q8TE77 659 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 C1orf115Q9H7X2 142 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 GPHNQ9NQX3 736 aaPredicted RBP18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 ATP8A2Q9NTI2 1148 aa18.24■□□□□ 0.51
SYNGR1-205ENST00000406293 COL4A4P53420 1690 aaPredicted RBP18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 MBD4O95243 580 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 IQSEC1Q6DN90 963 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 FBXO16Q8IX29 292 aaPredicted RBP18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 SLC38A10Q9HBR0 1119 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 POLR3EQ9NVU0 708 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 NOD1Q9Y239 953 aa18.23■□□□□ 0.51
SYNGR1-205ENST00000406293 SOWAHBA6NEL2 793 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 GOLIM4O00461 696 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 IQCF3P0C7M6 154 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 TMEM63BQ5T3F8 832 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 FAM133AQ8N9E0 248 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 MFSD14AQ96MC6 490 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 PHOX2BQ99453 314 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 ACAD9Q9H845 621 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 SUGCTQ9HAC7 445 aa18.22■□□□□ 0.51
SYNGR1-205ENST00000406293 GRXCR2A6NFK2 248 aa18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 H3BQ06 376 aaPredicted RBP18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 BAIAP3O94812 1187 aa18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 HFE2Q6ZVN8 426 aa18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 TGS1Q96RS0 853 aaKnown RBP18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 CLIP2Q9UDT6 1046 aa18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 Q9Y3F1 56 aa18.21■□□□□ 0.51
SYNGR1-205ENST00000406293 TCRBV5S4A2TA0A5A2 114 aa18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 TRIM27P14373 513 aa18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 BFSP2Q13515 415 aa18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 SLFNL1Q499Z3 407 aa18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 MTG1Q9BT17 334 aaPredicted RBP18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 A1CFQ9NQ94 594 aaKnown RBP18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 RNF146Q9NTX7 359 aa18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
SYNGR1-205ENST00000406293 ST18O60284 1047 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 OAZ1P54368 228 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 WDR5P61964 334 aaKnown RBP18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 NBPF20Q3BBV1 942 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 TAPT1Q6NXT6 567 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 FAM117BQ6P1L5 589 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 NYAP2Q9P242 653 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 FAM50BQ9Y247 325 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 SLC4A4Q9Y6R1 1079 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 BAZ2AQ9UIF9 1905 aaKnown RBP18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
SYNGR1-205ENST00000406293 POTEB3A0JP26 581 aa18.18■□□□□ 0.5
SYNGR1-205ENST00000406293 PITPNM1O00562 1244 aa18.18■□□□□ 0.5
SYNGR1-205ENST00000406293 ALAS1P13196 640 aa18.18■□□□□ 0.5
SYNGR1-205ENST00000406293 ERVK-21P61565 698 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms