RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 COBLL1Q53SF7 1204 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 NCAPH2Q6IBW4 605 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 DTHD1Q6ZMT9 781 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 ZNF662Q6ZS27 426 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 HEATR3Q7Z4Q2 680 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 EEF2KMTQ96G04 330 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 PYM1Q9BRP8 204 aaKnown RBP11.07□□□□□ -0.64
MSH2-202ENST00000406134 SEMA6BQ9H3T3 888 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 RMND1Q9NWS8 449 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 HDAC6Q9UBN7 1215 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 GPR75-ASB3A0A0A6YYF3 556 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 B4DLN1 442 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 IL1R1P14778 569 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 OAS2P29728 719 aaKnown RBP11.07□□□□□ -0.64
MSH2-202ENST00000406134 CDK8P49336 464 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 TRIM14Q14142 442 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 CRY2Q49AN0 593 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 USP17L2Q6R6M4 530 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 ZNF771Q7L3S4 317 aaPredicted RBP11.07□□□□□ -0.64
MSH2-202ENST00000406134 PNMA5Q96PV4 448 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 C7orf25Q9BPX7 421 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 LACRTQ9GZZ8 138 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 L1RE1Q9UN81 338 aa11.07□□□□□ -0.64
MSH2-202ENST00000406134 SMCHD1A6NHR9 2005 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 SCN9AQ15858 1988 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 PSMD14O00487 310 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 EEF1GP26641 437 aaKnown RBP11.06□□□□□ -0.64
MSH2-202ENST00000406134 EHHADHQ08426 723 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 POTEDQ86YR6 584 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 TMEM260Q9NX78 707 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 GAKO14976 1311 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 GYS2P54840 703 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 FAM193AP78312 1265 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 GRB10Q13322 594 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
MSH2-202ENST00000406134 FILIP1LQ4L180 1135 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 CEP95Q96GE4 821 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 NUP88Q99567 741 aaPredicted RBP11.06□□□□□ -0.64
MSH2-202ENST00000406134 SLX4Q8IY92 1834 aa11.06□□□□□ -0.64
MSH2-202ENST00000406134 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 KLRF2D3W0D1 207 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 SLC37A4O43826 429 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 PPP1R11O60927 126 aaPredicted RBP11.05□□□□□ -0.64
MSH2-202ENST00000406134 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
MSH2-202ENST00000406134 ATP1A1P05023 1023 aaKnown RBP11.05□□□□□ -0.64
MSH2-202ENST00000406134 MYL1P05976 194 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 TSPY3P0CV98 308 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 TSPY8P0CW00 308 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 NT5C2P49902 561 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 SPAG1Q07617 926 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 ECM1Q16610 540 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 GALNT17Q6IS24 598 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 TPTE2Q6XPS3 522 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 WDR66Q8TBY9 1149 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 EPN1Q9Y6I3 576 aaPredicted RBP11.05□□□□□ -0.64
MSH2-202ENST00000406134 DUSP10Q9Y6W6 482 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 LAD1O00515 517 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 KIF5CO60282 957 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 BTDP43251 543 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 GLIS3Q8NEA6 775 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 NAPGQ99747 312 aaPredicted RBP11.05□□□□□ -0.64
MSH2-202ENST00000406134 NUDT12Q9BQG2 462 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 RIOX1Q9H6W3 641 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 ABCB6Q9NP58 842 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 ARGLU1Q9NWB6 273 aaPredicted RBP11.05□□□□□ -0.64
MSH2-202ENST00000406134 MYO1AQ9UBC5 1043 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 CTAGE9A4FU28 777 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 GABPAQ06546 454 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 BRD3Q15059 726 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
MSH2-202ENST00000406134 CERKQ8TCT0 537 aa11.05□□□□□ -0.64
MSH2-202ENST00000406134 CCDC194A0A1B0GVG4 234 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 PLEKP08567 350 aaPredicted RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 OR52Z1P0C646 297 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 PAPD7Q5XG87 772 aaKnown RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 PRR5LQ6MZQ0 368 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 KCNK18Q7Z418 384 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 CABP7Q86V35 215 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 CD209Q9NNX6 404 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 SIK3Q9Y2K2 1263 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 USP17L5A8MUK1 530 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 ENC1O14682 589 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 MSL3Q8N5Y2 521 aaKnown RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 PIGSQ96S52 555 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 TUBGCP2Q9BSJ2 902 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 ARFGAP3Q9NP61 516 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 LRRIQ3A6PVS8 624 aaPredicted RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 VGLL3A8MV65 326 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 CCNT1O60563 726 aaKnown RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 SRGAP2O75044 1071 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 PDHBP11177 359 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 CLK2P49760 499 aaKnown RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 CLEC10AQ8IUN9 316 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 CEP112Q8N8E3 955 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 P2RX5Q93086 422 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms