RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 ASTN1O14525 1302 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 GRIN2DO15399 1336 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 MROH7Q68CQ1 1323 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 ZNF532Q9HCE3 1301 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 CACNA1HO95180 2353 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 A0A0U1RQG5 324 aaPredicted RBP7.42□□□□□ -1.22
RPA3-204ENST00000406109 GOLIM4O00461 696 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 C6orf222P0C671 652 aaPredicted RBP7.42□□□□□ -1.22
RPA3-204ENST00000406109 ATP5JP18859 108 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 POU3F3P20264 500 aaPredicted RBP7.42□□□□□ -1.22
RPA3-204ENST00000406109 PTGS1P23219 599 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 RAB30Q15771 203 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 GNASQ5JWF2 1037 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 FAM83BQ5T0W9 1011 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 C12orf60Q5U649 245 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 CCDC174Q6PII3 467 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 C16orf86Q6ZW13 317 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 KHSRPQ92945 711 aaKnown RBP eCLIP7.42□□□□□ -1.22
RPA3-204ENST00000406109 NUP88Q99567 741 aaPredicted RBP7.42□□□□□ -1.22
RPA3-204ENST00000406109 LRFN3Q9BTN0 628 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 C1QTNF1Q9BXJ1 281 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 WNT8AQ9H1J5 351 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 ARMT1Q9H993 441 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 ECHDC1Q9NTX5 307 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 MSRAQ9UJ68 235 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 ZHX1Q9UKY1 873 aaPredicted RBP7.42□□□□□ -1.22
RPA3-204ENST00000406109 ARIH1Q9Y4X5 557 aaPredicted RBP7.42□□□□□ -1.22
RPA3-204ENST00000406109 SCN5AQ14524 2016 aa7.42□□□□□ -1.22
RPA3-204ENST00000406109 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 EPOPA6NHQ4 379 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 USP17L21D6R901 530 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 ATP2A1O14983 1001 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 ERC2O15083 957 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 TLL1O43897 1013 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 FGBP02675 491 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 CENPBP07199 599 aaPredicted RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 COPB2P35606 906 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 BEX3Q00994 111 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 TTF1Q15361 905 aaPredicted RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 SNRNP48Q6IEG0 339 aaKnown RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 OTOP2Q7RTS6 562 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 PCSK9Q8NBP7 692 aaKnown RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.41□□□□□ -1.22
RPA3-204ENST00000406109 GPATCH3Q96I76 525 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 CCDC17Q96LX7 622 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 AGBL1Q96MI9 1066 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 NOC4LQ9BVI4 516 aaKnown RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 TEX13BQ9BXU2 312 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 TRPV6Q9H1D0 765 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 ABHD16BQ9H3Z7 469 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 SH2D4AQ9H788 454 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 KANSL2Q9H9L4 492 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 SLC28A3Q9HAS3 691 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 GNEQ9Y223 722 aaKnown RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 MTCH2Q9Y6C9 303 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 DMXL1Q9Y485 3027 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 ZNF318Q5VUA4 2279 aa7.41□□□□□ -1.22
RPA3-204ENST00000406109 ZFHX2Q9C0A1 2572 aaPredicted RBP7.41□□□□□ -1.22
RPA3-204ENST00000406109 ZDBF2Q9HCK1 2354 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 RFXAPO00287 272 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 B4GALT4O60513 344 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 ARHGEF15O94989 841 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 MBD4O95243 580 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 ADD2P35612 726 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 CCL23P55773 120 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 CNTN2Q02246 1040 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 TMEM63BQ5T3F8 832 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 TSHZ3Q63HK5 1081 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 KRT40Q6A162 431 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 CTR9Q6PD62 1173 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 CXCL17Q6UXB2 119 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 ARMCX2Q7L311 632 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 CCDC144CPQ8IYA2 1237 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 OTUD7AQ8TE49 926 aaPredicted RBP7.4□□□□□ -1.22
RPA3-204ENST00000406109 VTI1AQ96AJ9 217 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 HAUS7Q99871 368 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 SLF1Q9BQI6 1058 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 LNPKQ9C0E8 428 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 HIPK3Q9H422 1215 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 SLC38A10Q9HBR0 1119 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 GOPCQ9HD26 462 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 ATP8A2Q9NTI2 1148 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 PAG1Q9NWQ8 432 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 PCDHA11Q9Y5I1 949 aa7.4□□□□□ -1.22
RPA3-204ENST00000406109 DDX49Q9Y6V7 483 aaKnown RBP7.4□□□□□ -1.22
RPA3-204ENST00000406109 MYH4Q9Y623 1939 aa7.4□□□□□ -1.23
RPA3-204ENST00000406109 TRIP12Q14669 1992 aaPredicted RBP7.4□□□□□ -1.23
RPA3-204ENST00000406109 RIF1Q5UIP0 2472 aaKnown RBP7.39□□□□□ -1.23
RPA3-204ENST00000406109 LCTP09848 1927 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 IGKV6D-41A0A0C4DH26 115 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 F5H6K3 240 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 NDUFB10O96000 172 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 KLRC3Q07444 240 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 PDAP1Q13442 181 aaKnown RBP7.39□□□□□ -1.23
RPA3-204ENST00000406109 ITGA7Q13683 1181 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 PPP2R2DQ66LE6 453 aa7.39□□□□□ -1.23
RPA3-204ENST00000406109 CHD1LQ86WJ1 897 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms