RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 SIRPGQ9P1W8 387 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 ACSL6Q9UKU0 697 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 EMC9Q9Y3B6 208 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 A0A1W2PQ45 241 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 A0A1W2PQY0 241 aa7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 PPM1BO75688 479 aa7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 FARP2O94887 1054 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 CD3EP07766 207 aa7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 CWF19L1Q69YN2 538 aaKnown RBP7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 CELF2-AS1Q8N7Q2 184 aa7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 MRFAP1L1Q96HT8 127 aa7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 PTCHD1Q96NR3 888 aa7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 SLC6A17Q9H1V8 727 aa7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 NSUN3Q9H649 340 aaKnown RBP7.21□□□□□ -1.26
HMGB1P13-201ENST00000406019 MYOCOSA0A1B0GUC4 107 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 VAMP4O75379 141 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 PNLIPP16233 465 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 ERVFRD-1P60508 538 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 POU4F1Q01851 419 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 MPZL3Q6UWV2 235 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 CYP2R1Q6VVX0 501 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 ANKRD13AQ8IZ07 590 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 HNRNPLLQ8WVV9 542 aaKnown RBP7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 FAM84AQ96KN4 292 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 DIRC2Q96SL1 478 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 LGR4Q9BXB1 951 aa7.2□□□□□ -1.26
HMGB1P13-201ENST00000406019 WTIPA6NIX2 430 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 STXBP3O00186 592 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 MSL3P1P0C860 447 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 HSD3B2P26439 372 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 MVKQ03426 396 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 LARP1BQ659C4 914 aaKnown RBP7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 GALNT18Q6P9A2 607 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 LRP10Q7Z4F1 713 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 TRIM59Q8IWR1 403 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 BHLHE22Q8NFJ8 381 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 ZNF552Q9H707 407 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 TNFRSF12AQ9NP84 129 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 IMPACTQ9P2X3 320 aa7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 MRPL42Q9Y6G3 142 aaKnown RBP7.19□□□□□ -1.26
HMGB1P13-201ENST00000406019 TBX1O43435 398 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 SUSD5O60279 629 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 GJB6O95452 261 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 NOP2P46087 812 aaKnown RBP7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 RASA3Q14644 834 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 SLC14A2Q15849 920 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 KRTAP1-3Q8IUG1 177 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 FBXO15Q8NCQ5 510 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 BVESQ8NE79 360 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 COPS5Q92905 334 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 EPB41L4BQ9H329 900 aa7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB1P13-201ENST00000406019 HRKO00198 91 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 ENPP3O14638 875 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 TSPAN15O95858 294 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 MED14OSP0DP75 135 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 YBX1P67809 324 aaKnown RBP7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 FXNQ16595 210 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 EEF1DP3Q658K8 133 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 ADAT2Q7Z6V5 191 aaKnown RBP7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 ZNF227Q86WZ6 799 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 SIRT2Q8IXJ6 389 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 APBA2Q99767 749 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 TRIM55Q9BYV6 548 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 MCOLN1Q9GZU1 580 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 DCP1AQ9NPI6 582 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 SNTG2Q9NY99 539 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 AKT3Q9Y243 479 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 MSRB2Q9Y3D2 182 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 BACE2Q9Y5Z0 518 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 TAF6LQ9Y6J9 622 aa7.17□□□□□ -1.26
HMGB1P13-201ENST00000406019 PEX10O60683 326 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 PRKCAP17252 672 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 AMPD2Q01433 879 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 ZNF124Q15973 351 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 DDR2Q16832 855 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 DPY19L1Q2PZI1 675 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 SLC10A6Q3KNW5 377 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 HLA-DQA1Q5Y7H0 255 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 GTF2IRD2BQ6EKJ0 949 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 GTF2IRD2Q86UP8 949 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 NLGN2Q8NFZ4 835 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 SRPK1Q96SB4 655 aaKnown RBP7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 GCM1Q9NP62 436 aa7.16□□□□□ -1.26
HMGB1P13-201ENST00000406019 C2orf71A6NGG8 1288 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 ARNTLO00327 626 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 KCNH1O95259 989 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 ITGAVP06756 1048 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 NAT2P11245 290 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 SDHBP21912 280 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 CORO7P57737 925 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 SYDE1Q6ZW31 735 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 RNPC3Q96LT9 517 aaKnown RBP7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 DEPDC7Q96QD5 511 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 NKX2-4Q9H2Z4 354 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 CD320Q9NPF0 282 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 FBLN5Q9UBX5 448 aa7.15□□□□□ -1.26
HMGB1P13-201ENST00000406019 FAM221BA6H8Z2 402 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms