RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 IRS2Q9Y4H2 1338 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 PP2D1A8MPX8 630 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 CYTH3O43739 400 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 IPO7O95373 1038 aaKnown RBP12.02□□□□□ -0.49
CLIP4-204ENST00000404424 ZBED6P86452 979 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 CDK17Q00537 523 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 CCDC122Q5T0U0 273 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 TPTE2Q6XPS3 522 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 CABP7Q86V35 215 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 NBPF5PQ86XG9 351 aaPredicted RBP12.02□□□□□ -0.49
CLIP4-204ENST00000404424 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 P2RX5Q93086 422 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 DUSP9Q99956 384 aaKnown RBP12.02□□□□□ -0.49
CLIP4-204ENST00000404424 NARFQ9UHQ1 456 aa12.02□□□□□ -0.49
CLIP4-204ENST00000404424 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 EIF3CLB5ME19 914 aaKnown RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 OR52Z1P0C646 297 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 TRIM21P19474 475 aaKnown RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 GNA11P29992 359 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 HERVK_113P62684 666 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 CKAP4Q07065 602 aaKnown RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 TBC1D8BQ0IIM8 1120 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 CASP8Q14790 479 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 DYNLL2Q96FJ2 89 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 EIF3CQ99613 913 aaKnown RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 TRIM9Q9C026 710 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 FLT1P17948 1338 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 ANO9A1A5B4 782 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 B4DLN1 442 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 KCNQ2O43526 872 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 LDHCP07864 332 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 PLCG1P19174 1290 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 USP14P54578 494 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 PDE4DQ08499 809 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 NONOQ15233 471 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 MAP9Q49MG5 647 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 NCAPH2Q6IBW4 605 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 KIAA1328Q86T90 577 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 ZSCAN29Q8IWY8 852 aaPredicted RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 NOA1Q8NC60 698 aaKnown RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 FAM71BQ8TC56 605 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 ERGIC2Q96RQ1 377 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 C6orf50Q9HD87 102 aa12.01□□□□□ -0.49
CLIP4-204ENST00000404424 CWC15Q9P013 229 aaKnown RBP12.01□□□□□ -0.49
CLIP4-204ENST00000404424 TARSL2A2RTX5 802 aaKnown RBP12□□□□□ -0.49
CLIP4-204ENST00000404424 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
CLIP4-204ENST00000404424 SLC35G1Q2M3R5 365 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 HSP90B2PQ58FF3 399 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 SH3RF3Q8TEJ3 882 aaPredicted RBP12□□□□□ -0.49
CLIP4-204ENST00000404424 JAKMIP2Q96AA8 810 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 TSGA10Q9BZW7 698 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 MED4Q9NPJ6 270 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 KLRF2D3W0D1 207 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 TFRCP02786 760 aaKnown RBP12□□□□□ -0.49
CLIP4-204ENST00000404424 TXNRD1Q16881 649 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 GOLGA5Q8TBA6 731 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 CNOT6LQ96LI5 555 aaKnown RBP12□□□□□ -0.49
CLIP4-204ENST00000404424 NHEJ1Q9H9Q4 299 aaPredicted RBP12□□□□□ -0.49
CLIP4-204ENST00000404424 VPS18Q9P253 973 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 TRIM10Q9UDY6 481 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 STX8Q9UNK0 236 aa12□□□□□ -0.49
CLIP4-204ENST00000404424 TULP2O00295 520 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 CCNT1O60563 726 aaKnown RBP11.99□□□□□ -0.49
CLIP4-204ENST00000404424 ATP1A1P05023 1023 aaKnown RBP11.99□□□□□ -0.49
CLIP4-204ENST00000404424 TM4SF1P30408 202 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 MTIF2P46199 727 aaKnown RBP11.99□□□□□ -0.49
CLIP4-204ENST00000404424 NAPAP54920 295 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 ASIC1P78348 528 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 ZSCAN26Q16670 478 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 FKBP15Q5T1M5 1219 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 ANKRD40Q6AI12 368 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 LRRC15Q8TF66 581 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 PURBQ96QR8 312 aaKnown RBP11.99□□□□□ -0.49
CLIP4-204ENST00000404424 PLIN2Q99541 437 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 NOC4LQ9BVI4 516 aaKnown RBP11.99□□□□□ -0.49
CLIP4-204ENST00000404424 AGPAT5Q9NUQ2 364 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 COL24A1Q17RW2 1714 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 SMCO2A6NFE2 343 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 ZPR1O75312 459 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 RPS6KA4O75676 772 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 RASA1P20936 1047 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 ACTN2P35609 894 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 LMAN1P49257 510 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 LETM2Q2VYF4 491 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 IQCEQ6IPM2 695 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 SUGCTQ9HAC7 445 aa11.99□□□□□ -0.49
CLIP4-204ENST00000404424 RASSF10A6NK89 507 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms