RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ANKRD35Q8N283 1001 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PURBQ96QR8 312 aaKnown RBP14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 HAUS7Q99871 368 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 HOMER2Q9NSB8 354 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PCDHA11Q9Y5I1 949 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 C5orf42Q9H799 3197 aa14.27□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ZBED4O75132 1171 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CA3P07451 260 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ATP5JP18859 108 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 UBE3CQ15386 1083 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CLASRPQ8N2M8 674 aaKnown RBP14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CHST13Q8NET6 341 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 PPP1R13LQ8WUF5 828 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 STRBPQ96SI9 672 aaKnown RBP14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 EPB41L4AQ9HCS5 686 aaPredicted RBP14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CD320Q9NPF0 282 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 A1CFQ9NQ94 594 aaKnown RBP14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TRMT13Q9NUP7 481 aaKnown RBP14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 SLC4A7Q9Y6M7 1214 aa14.27□□□□□ -0.13
SPTLC1P3-201ENST00000403408 DYNC1LI2O43237 492 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 PRDM1O75626 825 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CYP2C9P11712 490 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ATP2A2P16615 1042 aaKnown RBP14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 SNAP25P60880 206 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 SBK1Q52WX2 424 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 RASGRP2Q7LDG7 609 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MKL1Q969V6 931 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 KIF1BPQ96EK5 621 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 C1QTNF1Q9BXJ1 281 aa14.26□□□□□ -0.13
SPTLC1P3-201ENST00000403408 LPXNO60711 386 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 IFIT2P09913 472 aaKnown RBP14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MUM1L1Q5H9M0 696 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 POTEHQ6S545 545 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 EEPD1Q7L9B9 569 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 FBXO16Q8IX29 292 aaPredicted RBP14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 OSBP2Q969R2 916 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MTMR4Q9NYA4 1195 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TRIP12Q14669 1992 aaPredicted RBP14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 SCN10AQ9Y5Y9 1956 aa14.25□□□□□ -0.13
SPTLC1P3-201ENST00000403408 FAM86C2PA6NEL3 165 aa14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ZBBXA8MT70 800 aa14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TAP1Q03518 808 aa14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 SKIV2LQ15477 1246 aaKnown RBP14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 NOL8Q76FK4 1167 aaKnown RBP14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 DEFB128Q7Z7B8 93 aa14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MTIF3Q9H2K0 278 aaKnown RBP14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 RNF146Q9NTX7 359 aa14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ARPP21Q9UBL0 812 aaPredicted RBP14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 FBXO40Q9UH90 709 aa14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 FEM1BQ9UK73 627 aa14.24□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MYO7AQ13402 2215 aa14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MINDY4BA8MYZ0 360 aa14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CABYRO75952 493 aa14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 KCNA4P22459 653 aa14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 OAZ1P54368 228 aa14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 HSP90AB4PQ58FF6 505 aa14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ACAD9Q9H845 621 aa14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 COL4A4P53420 1690 aaPredicted RBP14.23□□□□□ -0.13
SPTLC1P3-201ENST00000403408 USP34Q70CQ2 3546 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TMEM232C9JQI7 657 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 SMARCA5O60264 1052 aaPredicted RBP14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 BMP3P12645 472 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 GRB10Q13322 594 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 GPNMBQ14956 572 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 SLFN13Q68D06 897 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 RPUSD2Q8IZ73 545 aaKnown RBP14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 GMCL1P1Q8NEA9 526 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ARNTL2Q8WYA1 636 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TNKSO95271 1327 aa14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 LCHNA4D1U4 455 aa14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TCTN1Q2MV58 587 aa14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TMCO2Q7Z6W1 182 aaPredicted RBP14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 MORC4Q8TE76 937 aa14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TRERF1Q96PN7 1200 aa14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 AP5M1Q9H0R1 490 aa14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 CYP39A1Q9NYL5 469 aa14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 ARIH1Q9Y4X5 557 aaPredicted RBP14.21□□□□□ -0.13
SPTLC1P3-201ENST00000403408 TANC1Q9C0D5 1861 aa14.21□□□□□ -0.14
SPTLC1P3-201ENST00000403408 ASB14A6NK59 587 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 M0R2C6 588 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 GPR37L1O60883 481 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 PURAQ00577 322 aaKnown RBP14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 AAK1Q2M2I8 961 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 TMEM31Q5JXX7 168 aa14.2□□□□□ -0.14
SPTLC1P3-201ENST00000403408 IQSEC1Q6DN90 963 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms